KEGG   Photorhabdus laumondii subsp. laumondii TTO1: plu3899
Entry
plu3899           CDS       T00149                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase)]
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
plu  Photorhabdus laumondii subsp. laumondii TTO1
Pathway
plu00740  Riboflavin metabolism
plu01100  Metabolic pathways
plu01110  Biosynthesis of secondary metabolites
plu01240  Biosynthesis of cofactors
plu02024  Quorum sensing
Module
plu_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:plu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    plu3899 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    plu3899 (ribD)
Enzymes [BR:plu01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     plu3899 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     plu3899 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CAE16271
Pasteur: plu3899
UniProt: Q7N0I8
LinkDB
Position
complement(4570883..4571992)
AA seq 369 aa
MNNDKKYMARALELARQGRFTTSPNPNVGCVIVHDGQIVGEGFHLRSGEPHAEVYALQIA
GDKAKGATVYVTLEPCSHHGKTPPCADALIAAGVSRVVAAMQDPNPQVAGRGLYKLQQAG
IAVEHGLMMEEAESLNRGFLKRMRTGFPYIQLKMATSLDGRTALASGESKWITSPQARCD
VQKFRAQCSAILSSSSTVLADDPHLTVRWSELDAEIQAVYPEENLCQPVRVIVDSQNRVS
PQHQVIQQPGYCWLARTKVDEHDLSENVEQILLPAHGIGVDLVSLMMQLGKRQINTVWTE
CGALLAGALLTLGLVDELVLYVAPKVLGDTARGLFTIPELKNLAEAPEFDIFDVQQVGPD
LRLHLRPVY
NT seq 1110 nt   +upstreamnt  +downstreamnt
gtgaataacgataaaaaatatatggcgcgcgctttggaattggcgcgtcaagggcgcttt
accacgtcacctaatcctaacgttggttgtgtgattgtgcatgatggacaaattgttggg
gaaggttttcatttacgttctggtgagccgcatgctgaggtttacgcgttacagatagcc
ggagataaagctaaaggcgcaactgtttatgtcacgcttgagccatgcagccatcacggt
aagaccccgccttgtgccgatgcgttgattgcggctggcgttagccgtgtggttgcggcg
atgcaggatcccaatccacaggtagcaggaagagggctttataagctgcaacaggctggt
attgcagtagaacatggactgatgatggaagaagctgaatctctcaaccgggggtttttg
aagcggatgcgtaccgggtttccatatattcagttgaagatggcgacttctctcgacggc
cgaacggcattagcttctggtgaaagtaaatggattacatcaccacaagctcgctgtgat
gtgcaaaaattccgtgctcaatgtagcgcgattctgagttccagtagcactgttttagct
gatgatcctcacttgacagttcgttggagtgaattggacgcagaaattcaggcggtttat
cccgaggaaaatctttgtcaaccggtacgtgttattgttgacagtcagaatcgtgttagc
ccccagcatcaggtcatacagcagcccggttattgttggctggctcgcactaaagtagat
gaacatgacttatctgaaaatgtagaacagatactgttacctgctcatggtattggggta
gatttggtgtcattgatgatgcagctgggtaagcgccagatcaacacagtctggactgag
tgtggggcattgctggcaggcgcattgctaactttagggttggtggatgaattggttctt
tatgttgcgccaaaagtgctaggtgatacggctcgtggtttgttcactattcctgaactc
aaaaatctggcagaggcaccggaatttgacattttcgatgtacagcaagttgggcctgat
cttcgtctgcatctgcggcctgtatactga

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