Candidatus Phytoplasma luffae: LFWB_5300
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Entry
LFWB_5300 CDS
T07569
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pluf
Candidatus Phytoplasma luffae
Pathway
pluf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pluf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LFWB_5300 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pluf03021
]
LFWB_5300 (rpoE)
03400 DNA repair and recombination proteins [BR:
pluf03400
]
LFWB_5300 (rpoE)
Transcription machinery [BR:
pluf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LFWB_5300 (rpoE)
DNA repair and recombination proteins [BR:
pluf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LFWB_5300 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
QTX03096
UniProt:
A0A975INP0
LinkDB
All DBs
Position
559556..560122
Genome browser
AA seq
188 aa
AA seq
DB search
MLNNSKEINSLASMAELSYQILQQNKQPMAVEQLIKKVFELKKIDFNNKEKFIQLYLDIV
LSGCFVFVGDNLWDVKKDNLNLWDQEYFANPTSDEEISTKEEDIEDILDFDEFESKSDEN
KDNTNEDIKEFKEEKLDLNIDEDEDESGILNNLDENLEEEEIFEVDKNKNDEYEEEITPD
YYEEYYNE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaataatagtaaagagattaattctttagcttctatggctgaactttcttatcaa
attttacaacaaaataaacaacctatggcggtagaacaattaattaaaaaagttttcgaa
ttaaaaaaaatagattttaataataaggaaaaatttattcagttatatttggatatcgtt
ttgagtggttgttttgtttttgttggtgataatttatgggatgttaagaaggataattta
aatttatgggatcaagaatattttgctaatcctacatcagatgaagaaattagtacaaaa
gaagaagatatagaagatattttagattttgatgagtttgaatctaaatcagatgaaaat
aaagataacacaaatgaagatataaaggaatttaaagaagagaaattagatttaaatata
gatgaagatgaagatgaatcgggaatattaaataatttagatgaaaatttagaagaagaa
gaaatttttgaagttgacaaaaataaaaacgatgaatatgaagaagaaatcacaccagat
tattatgaagaatattataatgaataa
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