Photorhabdus luminescens: CE143_14060
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Entry
CE143_14060 CDS
T08000
Symbol
ppk1
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
plui
Photorhabdus luminescens
Pathway
plui00190
Oxidative phosphorylation
plui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plui00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CE143_14060 (ppk1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE143_14060 (ppk1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plui03019
]
CE143_14060 (ppk1)
Enzymes [BR:
plui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
CE143_14060 (ppk1)
Messenger RNA biogenesis [BR:
plui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CE143_14060 (ppk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
EAL
Frataxin_Cyay
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
UJD75965
LinkDB
All DBs
Position
3242502..3244571
Genome browser
AA seq
689 aa
AA seq
DB search
MSQDRLYTEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFADVKRR
ILINEERGSATSARNVLKKIQAKVAKTDQEFDVLYNELLLEIARNQIFLINERQISPNQQ
IWLRQYFRQHLRPHTTPILINPETNLVEFLKDDYTYLAVEIVHGQNIQYALLEIPSDKVP
RFVNLPPEMPHRRKSMILLDNIMRYCLDEIFKGFFDYDSLNAYSMKMTRDSEYDLATEME
SSLLELMSSTLKQRLTAEPVRFVYQREMPDEMVELLRSKLGLSNDDSVIAGGRYHNFKDF
IKFPNEGKRNLLNKPLPRLRHTWFDNFRNGFDAIREQDVLLYYPYHTFEHVLELLRQASF
DPSVLSIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG
VHVIFSAPGLKIHAKLFLISRLEGEEIVRYAHIGTGNFNEKTARLYTDYSLLTANPQITN
EVRRVFNFIENPYRPVKFENLMVSPQNSRAMLNQLISQEIANAKANKPAGITLKINNLVD
KELVDRLYDASEAGVKIRLLIRGMCSLVPNQPGFSENIQIISIVDRFLEHDRVYVFTNDG
DEKVFLSSADWMTRNIDYRIEVAVCLLDPQLKQRVLDILELQFNDTVKARYVDKELSNSY
VPRGNKRKIRAQLAIYDYIKALEQPEPRA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagacaggctctataccgagaaagaacttagttggttatcattcaacgaacgt
gtgcttcaagaagcagcggataagagcaatccattaatagaacggatgcggttccttggt
atttactccaataatctggatgaattttacaaagtccgttttgctgatgtgaaacggcga
atattaattaatgaagaacggggatcggccaccagcgctcgaaatgtactgaaaaaaatt
caggctaaagtggctaaaaccgatcaagaatttgatgtgctctataatgaattgctatta
gaaatcgctcgtaatcaaatttttctaatcaatgaacgacaaatttcacccaatcaacaa
atctggttacgtcaatattttcgtcaacatctgcggccacatactacgccaatcttaatc
aatccagaaaccaacctggttgaatttctgaaagatgactacacttatctggcagttgaa
attgtccacggccagaatattcaatatgcgctattggaaattccgtcagataaggtgcca
cgttttgttaacttgccacctgaaatgccgcaccgccgcaaatcgatgatcctgctagac
aatattatgcgttattgtcttgatgaaattttcaaaggctttttcgattatgattccctg
aacgcctactcaatgaaaatgacccgtgattctgaatatgatctagccacagagatggaa
tcaagcttgctcgaactgatgtcatccacgctgaaacaacggctgacagcggaaccggta
agattcgtttaccagcgagaaatgccagacgaaatggtggaattactgcgtagcaaactt
ggtttgtcaaacgatgactcagtgattgctggcggacgctatcacaattttaaagatttc
attaaattccccaatgaggggaagagaaatctactcaataaacccttgccgagattacga
cacacctggtttgataatttccgcaacggttttgatgcgattcgtgaacaagatgtgctg
ctctattatccctatcacacctttgaacatgtattggaattattacgtcaggcttctttc
gacccaagtgtactttccatcaagatcaatatttatcgggtagcaaaagactcccgcatt
attgattccatgatccatgctgcccataacggtaaaaaagtgaccgtcgtggttgaatta
caggcacgatttgatgaagaagccaatattcattgggccaaacgactaaccgaagcgggt
gtacatgtcattttctcagcaccgggactaaaaattcacgcaaagctgttccttatttcc
cgtctggaaggcgaagaaattgttcgctatgcccatattggtacgggtaattttaatgaa
aaaacagctcgcctctataccgactactccttgctgacagccaatccacaaattactaac
gaagtgcgccgggtattcaacttcattgaaaatccctaccgtccggttaaatttgaaaac
ctgatggtttcgccgcaaaattcccgtgcgatgctcaaccagcttatttcacaggaaatc
gccaacgccaaagcaaataagcccgcaggcattacgttaaagattaataatctggttgat
aaagagctggtggaccgcttatacgacgcttcagaagcgggggtaaaaatacgtctgctg
atacgcggtatgtgttcactggtgcccaatcagcccgggtttagcgaaaatattcagatc
atcagtatcgttgaccgtttcctcgaacatgatcgggtttacgtattcactaatgacgga
gatgaaaaagtctttctttcgtctgccgattggatgacccgtaatatcgactaccgaatt
gaagttgcggtttgcctacttgatccacaattaaaacaacgggtattggatattctcgaa
ttacaattcaatgatacggtcaaagcccgttacgttgataaagaactgagcaatagttat
gtgccacgaggaaataagcggaaaatccgggcacaactggctatttatgactatataaaa
gccctcgaacaacctgaaccaagagcttaa
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