Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_19315
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Entry
A4R40_19315 CDS
T05478
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum00730
Thiamine metabolism
plum01100
Metabolic pathways
plum01240
Biosynthesis of cofactors
plum04122
Sulfur relay system
Module
plum_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A4R40_19315
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
A4R40_19315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plum03016
]
A4R40_19315
Enzymes [BR:
plum01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
A4R40_19315
Transfer RNA biogenesis [BR:
plum03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
A4R40_19315
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AWK43491
UniProt:
A0A6L9JMW6
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Position
complement(4560118..4561566)
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AA seq
482 aa
AA seq
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MKFIIKLFPEITIKSQTVRLRFIKILASNIRNVLKTLGDNIAVVRHWDNIEVRTKDENLG
VQICDALTRIPGIHHILQVEEREFRDMHHIFEQAYEAYGELLHNKTFCVRVKRRGKHQFT
SNEVERYVGGGLNQHIESAKVKLNHPDVTVNLEIDQDVLILVKARYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHKVRFV
AVDFEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQAIVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIRLAREIGTEDFARTMPEFCGVISKSPTVKAVKAKI
EAEEANFDFNILEKVVSEAQNVDIRQIAEQSSEQVVEIETVTAFAPTDVLLDIRSPDEQD
DRPLQLNGVEIKSLPFYKLSSQFGDLPKEKTYLLYCERGVMSRLQALYLSEQGFDNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattattaaattattccctgaaatcacgatcaagagccaaactgttcgtttg
cgctttattaaaattctcgcgagtaatattcgcaatgtgctgaaaacgttaggagataat
attgccgtggttcgccattgggataatatcgaagttcgcactaaagatgaaaaccttggc
gttcaaatttgtgatgcgctgacacgtattcccgggatccaccatattctgcaagtagaa
gagcgtgaatttcgtgatatgcatcatatctttgaacaagcttatgaggcttatggagaa
ttgctccacaataagacattttgcgtgcgggtaaagcgccgaggtaaacatcaatttact
tctaatgaagtagaacgctatgttggtggtggtttaaaccagcatattgaatctgcaaaa
gtaaaactcaatcatcctgatgtgactgttaatctggaaattgatcaagatgtgttgatt
ctggtaaaagcccgctatgaggggattggtggttttcctatcggaacgcaggaagatgta
ttgtctctaatttcgggaggttttgattccggtgtttccagctatatgctaatgcgccgt
ggctgtcgtgttcactattgtttcttcaatcttggcggttctgctcatgaaattggtgtg
aaacaggttgctcattatctttggaatcgttttggcagttcccataaagttcgtttcgtt
gctgtggattttgaacctgttgtcgctgaaattttggaaaaagttgatgatggtcaaatg
ggggtggtgcttaaacggatgatggtaagagcggcatctaaagttgcagagcgttatggc
gtgcaggcgattgttaccggtgaggctttgggacaggtttccagccagacactcactaat
ttgcgcttgattgataatgcatcggatacgttgattctgcggccactgatttctcatgat
aaagaacacattatcaggttggcacgtgaaataggcactgaggattttgctcgtacaatg
cctgaattctgtggtgttatttcaaaaagcccgacagtaaaagccgttaaagctaaaatt
gaagcagaagaagcgaatttcgattttaatattttggaaaaagttgtcagtgaagctcag
aatgttgatattcgtcagatcgcagaacaaagcagtgagcaagtggttgaaattgaaaca
gtgacagcgttcgctccaacggatgtgttattggatattcgttcacctgatgagcaagat
gatcggccattacagttgaatggtgtggaaatcaaatcattgccattctataagttgagc
agccagtttggtgatttgccaaaggagaagacttatctgctctattgtgaacgtggagta
atgagccgtttgcaggcactttatttatctgaacagggttttgataacgtgaaagtttat
cggccttaa
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