Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_24095
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Entry
A4R40_24095 CDS
T05478
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum00540
Lipopolysaccharide biosynthesis
plum01100
Metabolic pathways
plum01250
Biosynthesis of nucleotide sugars
Module
plum_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
A4R40_24095 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plum01005
]
A4R40_24095 (rfaD)
Enzymes [BR:
plum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
A4R40_24095 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
plum01005
]
Core region
A4R40_24095 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AWK44339
UniProt:
A0A6L9JLR4
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All DBs
Position
5621197..5622135
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AA seq
312 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDEGYKDILVVDNLKDGTKFINLADLDIADYMDKEEFIASI
LAGDDFGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERRTPFLYASSAATY
GGRTDNFIEERQYEKPLNVYGYSKFLFDQYVREILPQADSQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQRQNPKLFAGSEGFQRDFIYVGDAAAVNLWFWKNGVSGIYNCGTGRA
ESFQAVADAVVECHKDKSLTVEHIDFPEHLKGRYQRFTQADLTKLRAAGYDKPFKTVAEG
VTEYMHWLNQDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcactggcggtgctggatttattggtagcaatattgtcaaagcactaaat
gacgaaggatataaagatattctggtcgtagataatctaaaagatggtactaagttcatc
aatctggctgacttggatattgctgattacatggacaaggaagagtttattgccagtatt
ctggccggtgatgacttcggtgatattgacgctattttccatgaaggcgcttgttcatcc
acaaccgagtgggatggcaaatatatgatggataataactatcaatattccaaagaattg
ctgcactattgccttgaacgccgcactcctttcctgtacgcctcctcagcagcaacctat
ggcggccgcacggataattttatcgaagagcgtcaatatgagaagccactcaatgtttat
ggttactctaagtttctgttcgaccaatatgtccgggaaatcttgcctcaagctgattca
caaatttgtggtttccgttatttcaatgtgtatggaccacgtgaagggcacaaagggagt
atggctagcgttgcctttcatttgaataatcaaatcaatcagagacaaaaccccaaatta
ttcgccggcagtgaaggctttcaacgtgattttatctatgttggtgatgccgctgcggtt
aatctttggttctggaaaaatggcgtttccggtatttataactgtggaacgggtcgtgct
gaatctttccaagcggttgcagatgcagttgttgaatgccataaagataaatcactcact
gttgaacatattgatttccctgaacatctgaaaggtcgttatcagcgcttcacgcaagca
gatctgaccaaacttcgcgcggcgggttatgataagccattcaaaaccgttgccgaaggg
gtaacggaatatatgcattggctcaatcaggataagtaa
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