Paenibacillus lycopersici: GXP70_12100
Help
Entry
GXP70_12100 CDS
T07013
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plyc03009
]
GXP70_12100 (rsmD)
Enzymes [BR:
plyc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
GXP70_12100 (rsmD)
Ribosome biogenesis [BR:
plyc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GXP70_12100 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
RsmJ
MTS
Methyltransf_15
MethyltransfD12
Methyltransf_25
Methyltransf_31
PrmA
TRM
UPF0020
Methyltrans_SAM
Methyltransf_3
Met_10
Motif
Other DBs
NCBI-ProteinID:
QHT60606
UniProt:
A0A6C0FTX8
LinkDB
All DBs
Position
2745298..2745891
Genome browser
AA seq
197 aa
AA seq
DB search
MRVIAGTAKGRTLKAVPGKNTRPTTDKVKEAIFSMIGPYFDGGTALDLFAGTGGLGIEAL
SRGVDNAIFIDLEGASVEVIKQNLQAAGMADRAEIYRTDAVRAVKALAKRGLKFGLVFLD
PPYRMKDMDELMAELAARGLLEADATIVVEHDAEHRYPEAFAPYRQLKHAQYGDTAVTIY
RLVPEETPVETDGITEE
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
ttgagagtgatcgcaggcacggcgaagggccgtactttaaaagcggtgccgggcaaaaat
acgcgcccgacgaccgataaagtgaaagaggcgattttcagcatgatcgggccttatttc
gacggcggaacggcgcttgacctgttcgccgggacgggcggactcggtatcgaggcgctc
agcagaggcgtcgataatgcgatcttcatcgatctggaaggcgccagcgtcgaggtcatc
aagcagaatctgcaagcggccgggatggccgaccgcgcggagatttaccggacggatgcc
gttcgcgccgtcaaagcgctggcgaagcgcgggctgaagttcggactcgtattcctcgat
ccgccttaccggatgaaggatatggacgagctgatggccgagctggcggcgcgcggcctg
ctggaggcagacgcgacgatcgtcgtcgagcatgacgcggagcatcgttatccggaagcg
ttcgcgccgtacaggcagctgaagcatgcgcagtacggcgatacggcggttacgatctac
cgcctggtcccggaagaaacgccggttgaaacggatggaataacggaggagtag
DBGET
integrated database retrieval system
