Papilio machaon (common yellow swallowtail): 106708729
Help
Entry
106708729 CDS
T05138
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106708729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106708729
Enzymes [BR:
pmac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
106708729
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106708729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CbiA
AAA_10
MMR_HSR1
nSTAND3
RsgA_GTPase
AAA_16
AAA_24
ATP_bind_1
AAA_35
AAA_21
AAA_14
Motif
Other DBs
NCBI-GeneID:
106708729
NCBI-ProteinID:
XP_014355761
UniProt:
A0A194RI29
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MTEVQLQEFKLEPNSELRFEVESKNEKVVLEVKSGYAELFGTELVKGKPYEFHTGAKVAV
FTWHGCTVELRGRTEVSYVAKETPMVIYLNVHAALEQQRVAAEQENTRGPVTMIVGPGDV
GKSTLTRLLLNYAVRMGRRPIYVDLDVGQGHISVPGTIGALLVERPASIEEGFSQQAPLV
YHFGHKSPEENIELYNTIVSRLAEVIAERCENNKKASTSGVIINTCGWIKGAGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVAERSPAQRAEGRDARIREYF
YGRRTPYYPHSFDVKYSDLKIYKVGAPSLPDSCMPLGMRAEEALTKLVSVSPGPALQHRL
LAVSFAAEPDDHVPHCNLAGFVCVTAVDPERQTMTILSPQPRPLPTTVLLLSELQYMDNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagttcagttacaagaatttaaacttgagccaaattctgaactacgttttgaa
gtcgaatcaaaaaatgaaaaagtagttcttgaggttaaaagtggctacgccgagctgttt
gggacagagttggtgaaggggaaaccatatgaattccatacaggtgctaaagtggctgtg
ttcacgtggcacggctgcacagtagagctcagaggcaggacggaagttagttatgtggcg
aaggagacaccaatggtaatctatctaaatgtccatgcggcattggaacagcagagggtt
gctgcagagcaggagaacacacggggccccgtcaccatgattgtgggccctggggatgtg
ggcaagtccacactcacacgtttgttgctcaactatgcagtgcggatgggtcggagacct
atatatgtagatctagatgtcggccaaggtcatattagtgtcccagggacaattggtgcg
ctccttgtggagcgtccggcttccattgaggagggcttcagtcaacaagcaccgcttgtc
taccactttggtcacaagtcccccgaagagaacattgagctctacaacacaattgtctcc
cggctggctgaagtcatcgctgagaggtgtgaaaataataaaaaagcatcaacatctggc
gtgatcatcaacacctgcggctggatcaagggtgcgggatacaaggtgctgacacacgcc
gcacaggccttcgaggtggatgtgatattagtgttggacaatgagagattatacaatgaa
ctgaaacgggatatgccaaagtttgtgaaagttgtgtacttgcccaaaagtggaggagtg
gcggagcggtcgccggcgcaacgcgcagaggggcgcgacgctcgcatccgggagtacttc
tacggccgccgcacgccatactacccccactccttcgatgtcaagtactcggacctcaag
atatataaggtgggggcgccctcgctgccggactcgtgtatgccgctgggcatgcgcgcg
gaggaagcgctcaccaagctggtgagtgtgtcccccgggcccgcgctgcagcatcgcctg
ctcgccgtctccttcgcagccgagccagacgaccacgtgccgcactgcaacctcgccggc
ttcgtctgcgtgactgcggtggacccggagcggcagacaatgacaatcctgtctccgcag
ccgcggccgctgcccaccactgtgctgctgctgtccgagctgcagtacatggacaaccac
tag
DBGET
integrated database retrieval system
