Parus major (Great Tit): 107199816
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Entry
107199816 CDS
T04864
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaj03016
]
107199816 (CDKAL1)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
107199816 (CDKAL1)
Transfer RNA biogenesis [BR:
pmaj03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
107199816 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
107199816
NCBI-ProteinID:
XP_015472885
Ensembl:
ENSPMJG00000018186
LinkDB
All DBs
Position
2:complement(59485129..59861924)
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AA seq
582 aa
AA seq
DB search
MPAACESVLEDIEDIVSAEDLKPHDRQFVRRNVFPKVRKRNSQKIVQTDDEPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVHTASISRPLAKGEVSGLTEEFRRSPQNGTNWKAQPSAEIPVKTQL
SSCMALQLPWQQEGGGLKILSVSLALLAVLVMFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgagtcagtgcttgaagatatcgaagacatcgtgtcagcagaagat
ttgaagccacacgatcggcagtttgtgagaaggaatgtttttcccaaagtgcgaaaacgc
aactcccaaaaaatcgttcagacagatgatgagcctccaagtgacagcattattcctggt
gttcagaaaatctggattcgtacatggggatgttctcacaataattcagatggtgaatac
atggctgggcagctggctgcatatggatacaaaattacagataactctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccacttcagaaactcc
atcaagaaagcccaagaagggaagaagaaagttgttctagcaggctgtgtaccacaagcc
caacctcgtcaggagtacctgaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtttggggggagcccgactggatttaccaaagattaggaagaat
ccactgatagaaataatttccatcaatacagggtgtctcaatgcatgtacctactgtaaa
actaagcatgccagaggagatctagcaagttaccctattgaagaactggtggacagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctgtggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattctcaatcatccaagagtatatgcttttctgcacataccagtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatactgtgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacata
atttgtggttttccaggagagacagatgaagattttcaagaaactatgaaacttgtagaa
ctttacaggtttccaagcctgtttattaatcagttctacccacgtccaggaaccccagct
gcaaaaatgcctcaagttccagctgcagtgaaaaaacagagaacaaaggatctctcccag
ctgtttcattcatacaatccatatgatcataaggttggtgagaggcagagagttctggta
acagaagaatcttttgactccaattactacgttgctcacaatcctttctatgagcaggtt
cttgtaccaaaggatcctctgttaatgggcaagatggtagaagtgaatatttatgaagct
ggaaaacatttcatgaaggggcagccagtatcagatgccagagttcacactgcatccatc
agcagaccgttagcaaaaggagaagtttctggtttaacagaggagttcagacgttcacca
cagaatggcacaaactggaaagcacagccttctgctgagatcccagtgaaaacacagctc
agctcctgcatggctttgcagctcccatggcaacaagagggaggtggactgaagatcctg
tctgtcagcctggctctactggcagttcttgttatgttttactatggaggaatgaaaaca
gaactgtga
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