Parus major (Great Tit): 107202925
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Entry
107202925 CDS
T04864
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04010
MAPK signaling pathway
pmaj04210
Apoptosis
pmaj04218
Cellular senescence
pmaj04620
Toll-like receptor signaling pathway
pmaj04621
NOD-like receptor signaling pathway
pmaj04622
RIG-I-like receptor signaling pathway
pmaj04623
Cytosolic DNA-sensing pathway
pmaj04625
C-type lectin receptor signaling pathway
pmaj04920
Adipocytokine signaling pathway
pmaj05132
Salmonella infection
pmaj05164
Influenza A
pmaj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107202925 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107202925 (NFKB1)
04218 Cellular senescence
107202925 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107202925 (NFKB1)
04621 NOD-like receptor signaling pathway
107202925 (NFKB1)
04622 RIG-I-like receptor signaling pathway
107202925 (NFKB1)
04623 Cytosolic DNA-sensing pathway
107202925 (NFKB1)
04625 C-type lectin receptor signaling pathway
107202925 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
107202925 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107202925 (NFKB1)
05168 Herpes simplex virus 1 infection
107202925 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
107202925 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107202925 (NFKB1)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
107202925 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
107202925
NCBI-ProteinID:
XP_015479465
Ensembl:
ENSPMJG00000009729
LinkDB
All DBs
Position
4:20776130..20833697
Genome browser
AA seq
1002 aa
AA seq
DB search
MSYVLLSHYHRVCTAVYFHSRLKMAAEDSYIMGVSDPQMFAVDQFMGMNALFNSTNYITS
DLPLRTADGPYLQIIEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGP
AKVIVQLVTNGKYVHLHAHSLVGKFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFET
LETRMIDACKKGYNPGLLVHPELGYLQAEGCGDRQLTEREREIIRQAAIQQTKEMDLSVV
RLMFTAFLPDSNGSFTRKLDPVISDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLC
DKVQKDDIQIRFYEEDENGGMWEGFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQ
LRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGG
AGSGFSFPSYGYSAFGGMHFHPGTTKSNAGMKHEALSNCTAGQDRKSCDKQSDEWDMKGD
VKVETLERTECTVSAANEKKEDSVFSCKTEVREADCRWQDALFLEKAMQLARRHCNALFD
YAVTGDVKMLLAPQRHLTAVQDDNGDNVLHLAIIHLHTELVKDLLEVMPNLNYNDIINMR
NDLYQTPLHLAVITKQAKVVEDLLKAGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHE
KVSPMVNLPNGEGLSAIHMVVMANSMSCLKQLIAAGVNVNAQEQKSGRTALHLAVEQENI
PLAGCLLLEGDADVDSTTYDGTTPLHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDD
VKGDDEGIVPGTTPLDMAANSEVYDILNGKPYESAEVLEDLLTQGHLRELNENSKMQLYK
LLELPDPTKNWSTLAQKLGLGILNNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQMDH
TEAIQIIQEALSISRRPSPLEDSTAKALPSSLLTFANGETGELYNSRFQDTESTCDSGVE
TSFRKLSFTYSDSLNSKSSLTLGKMALGYGHENSGQSNYIAD
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgtgctcttgagccactatcatcgcgtgtgtactgctgtgtattttcattca
agacttaaaatggcagcagaagattcctatattatgggagtatctgatccccaaatgttt
gcagtggatcagttcatgggaatgaatgctttatttaatagtacaaattacatcacttca
gacttaccactacgaacagcagacggaccatatcttcaaatcatagaacagccaaaacag
aggggatttcgtttccgatacgtatgtgaagggccttcgcatggtggacttcctggtgct
tctagtgaaaagaacaaaaagtcataccctcaggtcaaaatctgcaattatgttggacct
gcaaaagtaattgtccagttagtaactaatgggaaatatgtccacttacacgctcacagc
ttggtgggaaaattctgcgaagacggagtgtgcacagttaacgcaggacctaaggacatg
gtcgtaggatttgcaaatcttggaatacttcatgtcacgaagaagaaagtgtttgaaact
ctggaaacacgcatgatagatgcttgcaagaagggatacaacccgggactcctggtgcat
ccagaactgggctatctgcaggcagaaggatgtggagacagacagctaactgaacgggag
agagaaatcatccgccaggcagccatacagcagaccaaggaaatggatctcagcgtggtg
cggctcatgttcacagcctttcttcccgacagcaacggcagcttcacacggaaacttgat
cccgtgatatcagatgcgatatatgacagcaaagctcccaatgcctccaacctaaaaatt
gtaagaatggacagaacagcagggtgcgtgacgggaggggaagaaatttacctgctctgt
gacaaggttcagaaagatgatattcaaatacgtttctatgaagaggatgagaatggtggg
atgtgggaaggctttggagatttttctcctacggatgtacacagacagtttgctattgtg
ttcaaaacacccaagtaccgagatgtcaatatcacaaagccagcatctgtatttgtacaa
ctgcgtaggaaatctgatctagaaacaagcgaaccaaagccttttctctactatccagaa
atcaaagataaggaagaagtgcaaaggaaacgacagaagctcatgccaaacttctctgat
ggctatggtggaggcagtggcactggaggtggtggcatgtatggaggggcaggtggtggt
gctggctctgggttcagttttccttcatatggatactctgcttttggagggatgcatttc
catcctggcacaacgaagtccaatgctggcatgaaacatgaagctctatcaaactgcaca
gctggacaagacagaaagagctgtgataaacaaagtgacgaatgggacatgaaaggtgat
gtgaaggtggaaaccctggagaggactgagtgcacagtgtctgctgctaatgagaaaaag
gaggattctgttttttcctgtaaaactgaagtaagggaagcagattgcaggtggcaggat
gctctgttcctggagaaggccatgcagcttgccaggcgccactgcaacgctctctttgat
tatgccgtaaccggagatgtgaagatgctgttggcacctcagcgccatctcaccgctgtc
caggatgataatggggacaatgtccttcatttagcaattatccaccttcatactgagctg
gtgaaagacctcttggaagtgatgcccaatttgaattacaatgatatcattaacatgaga
aatgacctctatcagacgcccctgcacctggcagtaatcacaaagcaggcaaaggtggtg
gaagacttgctaaaggctggagcagatgtcagccttctggatcgccatggcaattctgtc
ttacatttagctgctactgaaggagatgacaagattttgagtctactcctcaagcatgag
aaggtatctccaatggtcaacctccccaatggtgaaggtctcagtgcaattcacatggtg
gtgatggcaaatagcatgtcctgcctcaaacagctgattgctgctggagttaacgtcaat
gctcaggaacaaaaatctggacgaactgcattgcatctggctgttgaacaagagaacatc
cccttggcaggctgccttttgcttgagggtgatgcagatgtggacagcactacatatgat
gggacaactccacttcacatagcagctggaaggggctcaacaaaattggcagcagttctc
aaagcagcaggtgcaaatcctcatattgagaactttgagccattgtttgatctagatgat
gtgaaaggtgatgatgaagggattgtgcctggaacaacaccactggatatggcagccaac
agtgaggtgtatgacatactaaatggcaaaccctacgagtcagcagaggttttggaggac
ttactcacacaaggacatttgagagagctgaatgaaaattccaagatgcagctttacaaa
ctattggaattgcctgatccaaccaaaaactggtccaccctagcacaaaaattgggtctt
ggcatacttaataatgccttcaggttgagcccttccccatcgaagactctgctggataac
tatgaggtttctggcggtacagttcaagagctgatcactgctttgagacagatggatcat
acagaagccatacaaataattcaggaagcactatccatctcacgcagaccatctcccctg
gaggacagtacagcaaaagctcttccatcatcactgctcacctttgcaaacggagagaca
ggtgagctctataatagcagatttcaagacaccgaaagtacatgtgacagcggggtggag
acctccttccgcaagctgagtttcacctactcagactctctgaacagcaagtcctcacta
acactgggcaaaatggccctgggctatggacatgaaaattcagggcaaagcaattatata
gctgactag
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