Parus major (Great Tit): 107203204
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Entry
107203204 CDS
T04864
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03020
RNA polymerase
pmaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107203204 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
107203204 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107203204 (POLR2B)
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107203204 (POLR2B)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107203204 (POLR2B)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107203204 (POLR2B)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107203204 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107203204
NCBI-ProteinID:
XP_015480402
Ensembl:
ENSPMJG00000008930
LinkDB
All DBs
Position
4:15919347..15936562
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgacgaagacgatgatgaaatcacccccgac
ttgtggcaagaagcctgctggattgttattagctcctattttgatgaaaaaggtttagtc
aggcaacagttggattcctttgacgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgacttacaagctgaagcccagcatgcctcaggagaagtggaagag
ccaccccggtatctgttgaagtttgaacaaatctatctctccaaacctacacattgggaa
agagatggagcaccctcacctatgatgccaaatgaagccagactgagaaaccttacgtat
tccgcccccttgtatgtggatataactaaaacagttattaaagaaggggaggaccagttg
cagacccagcatcagaaaacctttataggaaaaattcctatcatgttgcgttccacatac
tgtttgctgaatggcttaactgaccgtgatctttgtgagctgaacgagtgtccacttgat
cctggtggctacttcatcattaatgggtcagaaaaggttctgattgcccaggagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggtcagcatgctg
gccaggggtggacagggtgcaaagaagagtgccattggtcagcgcattgtagcaactctg
ccttatatcaaacaagaggtccccatcatcattgtcttccgtgcactcggctttgtgtct
gacagggacattctagagcacatcatatatgattttgaagacccagaaatgatggaaatg
gtcaaaccttctctggatgaagcctttgtcattcaggagcaaaatgttgccctaaacttc
attggctcaagaggtgccaagccaggtgtcaccaaagaaaagagaatcaaatatgccaaa
gaagtcttgcagaaggaaatgctcccgcacgttggtgtcagtgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagactgttgctggcagcactgggaagaaga
gagctggatgacagagatcattatggcaacaaaagactggatcttgctgggccacttttg
gctttcctgttcagaggaatgttcaagaatttgctgaaggaagtgagaatatatgcacaa
aagttcattgacagagggaaagatttcaacttggagttggcaattaaaacaagaattatt
tcagatggtttgaaatattcattggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttgaaccggctgacttttgcatccactctttcc
cacctgaggcgcctgaattctccgattgggagagacggaaaactggccaagccgcggcag
ctgcacaacaccctgtggggaatggtttgccctgctgagacccctgagggtcatgcagta
ggacttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcccca
attctggaattcttggaagagtggagtatggaaaacctagaagaaatatctccagcagca
atagctgatgctaccaagatatttgtcaatggctgctgggtaggaatacacaaagatcca
gagcagctgatgaataccctaaggaagcttcgtcgtcagatggacatcattgtgtcagag
gtctcaatgattagagatattcgtgagcgagaaatccgcatctacactgatgcaggcaga
atttgtcggccccttttaattgtagagaaacagaagctgctgctgaagaaaaggcacatt
gaccagctgaaggaacgagagtataacaattacagttggcaggatcttgtggccagtggt
gtagtagagtacattgacaccctggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatattgttcaacatacacacactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaagcaggctatgggagtctacatcaccaacttc
catgtccgtatggatacgctggcacacgtgttgtattatccccagaagcccctggtaaca
acgcgctccatggagtacctgaggttcagagagttaccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcattatgaaccgttctgct
gttgacagaggctttttcaggtctgtgttctatcgctcatacaaagagcaggagtctaag
aaagggtatgaccaagaggaagtttttgaaaagcctacacgtgaaacttgccaaggtatg
agacacgcaatctatgacaaacttgatgatgatggtttgatagcccctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtcacactgccagaaaatgaagatgagctg
gaaagcaccaacagacgtttcaccaagagagactgcagcaccttcctgcgcaccagtgag
actgggattgtagatcaggtcatggtaaccctgaaccaggaaggatacaaattctgcaag
atcagggtgcgttctgtaagaattccacaaattggagataaattcgctagcagacatggt
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacgtgtgaaggc
atcacacctgatatcattatcaacccccacgccatcccttcccgcatgaccattggtcac
ttgatcgagtgtcttcagggcaaggtgtctgcaaacaagggagaaattggtgatgctaca
ccttttaatgatgctgtcaatgtgcaaaagatttcgaaccttctatcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacctcccag
atcttcattggtcctacctattaccagcgcttgaagcacatggtggatgacaaaatccat
tcccgtgcacgagggccaatccagatccttaacagacagcccatggaaggcagatctcgt
gatggtggccttcgctttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccataccaggtccatgtgtgtaac
ctctgtggaatcatggcaattgcaaacacgaggactcacacctacgaatgccgcggatgc
cgtaataaaactcagatatctttggttcgaatgccctatgcctgcaaactcctcttccaa
gaactgatgtctatgagtattgcacctcgtatgatgagtgtttag
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integrated database retrieval system
