Parus major (Great Tit): 107212141
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Entry
107212141 CDS
T04864
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04020
Calcium signaling pathway
pmaj04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107212141 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107212141 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107212141 (GRIN1)
Ion channels [BR:
pmaj04040
]
Ligand-gated channels
Glutamate (ionotropic)
107212141 (GRIN1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
107212141
NCBI-ProteinID:
XP_015500563
Ensembl:
ENSPMJG00000014511
LinkDB
All DBs
Position
17:9869524..9889611
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AA seq
729 aa
AA seq
DB search
MLSPVLAVPGAGHGPSNAEPSPLPSAGVIGLQLINGKNESAHISDAVAVVAQAVHDLFEK
ENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQN
RKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADG
TCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVA
DGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTI
LVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDA
LTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRP
EERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQA
VRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSH
ENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRH
KDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTSGIHFGYPRAVAEPDLVTPS
PVGKVTLIGTKAIGEDSLPAPGAERGRAPRPAAPAPWRLVLPACANQQYHPTDITGQLNL
SDPSVSTVV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctcagccctgtgctcgctgtcccaggagcgggacacggtcccagcaatgctgagccc
tcccctctgccctcggcaggagtgatcggcctgcagctcatcaatggcaagaacgagtca
gcccacatcagtgacgctgtggccgtggtggcccaggccgtgcatgacctgtttgagaag
gagaatatcacagacccaccgcggggctgcgtgggcaacaccaacatctggaaaacagga
cccctttttaagagggtgttgatgtcctccaagtactcagagggtgtcactggccgggtg
gagttcaacgaggacggggacaggaagtttgccaactacagcatcatgaacctgcagaat
cggaaactggtccaggttgggatttacaacggcagcaatgtcctgaccaacgacaggaag
atcatctggccagggggggaaaccgagaaacctcaaggctatcagatgtcaaccaagttg
aagattgtgaccatccaccaagagccttttgtgtatgtgaagcccactcaggcagatggg
acgtgcagggaggaattcaccatcaatggagatcctgtcaaaaaggtcttctgcactgga
cccaatgagaccatcccaggccgtcccaccgtggcactgtgctgctacggcttctgcatc
gacctgctcatccgcctggcaggggtgatgaacttcacctatgaggttcacctggtggct
gatggtaaatttggtacccaagagcgggtgaacaacagcaacaagaaggagtggaacggg
atgatgggggagctgctgagcggccaagcagacatgatcgtggctcccctcaccatcaac
aacgagagggctcagtacattgagttctccaagcccttcaagtaccagggcctcaccatc
ctcgtgaagaaggaaatcccccgcagcaccctggactcgttcatgcagcccttccagagc
acgctctggctgctggtggggctgtctgtgcacgtggtggcagtgatgctgtacctctta
gaccgattcagcccatttggccggttcaaagtaaacagtgaggaggaggaggaagatgcc
ctgactctctcctcagccatgtggttctcctggggggtcctgctgaactctggcattgga
gaaggtgctccccggagtttctctgcccgtatccttggcatggtgtgggctggctttgct
atgatcattgtggcttcatacactgccaacctggcagccttcctggtgttagaccgacct
gaggagaggatcacaggcattaacgacccccggctgcgcaacccctcggataaattcatc
tacgccacggtgaagcagagctccgtggacatctacttccgacggcaggtggagctgagc
accatgtacaggcacatggagaagcacaactacgagagcgctgccgaggccatccaggca
gtgagggacaacaagctccacgccttcatctgggactcggcagtgctggagtttgaggcg
tcccagaagtgtgacctggtgacgacgggggagctcttcttccgctccggcttcgggatc
gggatgcgcaaggacagcccctggaagcagaacgtctccctggccatcctcaagtcccac
gagaatggcttcatggaggatttggacaagacttgggtgaggtatcaagagtgtgattcc
cgtagcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtg
gctggaggtattgttgccgggatatttttaatattcatagagatagcttacaaaaggcat
aaggacgcgcggaggaagcagatgcagctggcgttcgcggccgttaatgtgtggaggaaa
aacctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcacc
agcgggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtcc
cccgtcggaaaggtcacactcattggcaccaaagcaattggggaggactcgttgccagcg
cccggcgccgagcgcggccgggccccccggcccgcggcccccgcaccatggcggctggtg
ctcccagcctgcgccaaccagcagtatcaccccaccgacatcactggccagctcaacctc
tccgacccctcagtcagcactgtggtgtga
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