Parus major (Great Tit): 107212243
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Entry
107212243 CDS
T04864
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04020
Calcium signaling pathway
pmaj04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107212243 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107212243 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107212243 (GRIN2C)
Ion channels [BR:
pmaj04040
]
Ligand-gated channels
Glutamate (ionotropic)
107212243 (GRIN2C)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
107212243
NCBI-ProteinID:
XP_033374674
Ensembl:
ENSPMJG00000000130
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All DBs
Position
18:complement(6151302..6162196)
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AA seq
1331 aa
AA seq
DB search
MGRAPAHALLLSMVLGCSAAFTDILLPGPEEPVVNVAVVFGGTSYPLHIRSRLSSQSFLD
MPLEIHPITVVVNNTNPSTLLTQICDILAGHKIHGIVFEDNVGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQMQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQEVLTFEMSQEQSSSRTQRLLRQIDAQVLIVYCSREEAEYLF
SMAEQAGLVGPGYVWIVPSMTVGNMEVPPSSFPVGLISVVTESWKLSLRQKVRDGVAIIA
MGAASFFRAHGYLPEVGRDCWTPTRATNTNTSFYQHLLNVTWEHRDFSFNEGGYLIRPTM
VVITLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSFMQPVVDNRHLTVATLEERPFVIVEN
TDPSTGVCVRNTVPCRKQTNSSHSGNGLVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYL
VTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVAR
SNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNQNLTSGKRPGGPSF
TIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYI
DTVSGLSDRKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTS
LKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLAL
LQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEH
LVYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQTLSSPGRVPTPDVTASSAQANVLKML
QAAKEMVTTASVGGSLEQATRTIEDWSNHSERLQTTFSLRTPQLVVQNSTGAHRGPPPGP
AERLGRTYAPKGAPLGLPLPQPIPVDSRLHGEENWREANEHPHLLHPLKFRGDCVGDEAL
TGFPHLLVKTAPGGDYREQMLVGNHVGAPLPPPTTPRDLPPPDIYREHKRPSGRGDRLPN
TPLLQRDGAHRGSGTLPRLLSAAEKKREAGSAFLPPSCSRGAFPKVSRTCRARGEPARPE
AAVMEREKLSRWASSARAPGERGEKRRPAGLRRCGATRPPARTDVPDLFPESEPGYGCGS
RCPQATGRLPPRSPVTRLPSYREACRQNPRATATVPACAPHACMNSYANLPLYARHLVRG
SPPPREPSGLHPCERGPGRWDSGCRDCGRRGELALLRAVGADRREPLVARGVASPCAGGS
WRRVSSLESEV
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagcgccggcacacgctctgctactgtcgatggtgctgggctgctcggctgcc
ttcacagacatcctgctgccaggccctgaggagccagtggtcaacgtggccgtggtgttt
gggggcacatcctaccccctgcacatccgctcccgcctgagctcccagagcttcctggac
atgcccctggagatccaccccatcactgtagtcgtcaacaacaccaaccccagcaccctc
ctcacccagatctgcgacatcctcgccggccacaagatccacggcattgtctttgaagac
aacgtgggcacggaggctgtggcccagatccttgacttcatctcgtcccagacccaggtc
cccatcatcagcatcagtggcgggtctgcagtggtcctgaccccaaaggagcccggatca
gctttcctgcagttgggtgtctccattgagcaacaaatgcaggtgatcttcaaggtgctg
gaggaatacgactggggctcctttgctgtcatcaccagcctctacccaggctacaacatt
ttcctggatgtcatccgctccttcacggatgccagctacttcggctgggagctgcaggag
gtgctcaccttcgagatgagccaggagcagagcagctccaggacgcagcggctcctgcgc
cagattgatgcccaggtcctcattgtttactgctcccgagaggaggccgagtatctcttc
tccatggcggaacaagctgggcttgtggggccaggatacgtctggattgtgcccagcatg
acagtgggcaacatggaggtgccaccctcctccttcccggtcggcctcatcagtgtggtg
acagagagctggaaactgagcctgcggcaaaaggtgcgagacggcgtggccatcattgcc
atgggggcagccagcttcttccgtgcccatggctacctcccagaggtagggcgggactgc
tggacccccaccagagccaccaacaccaacacaagcttctaccagcacctcctcaatgtg
acgtgggagcaccgggacttctccttcaatgaaggtggctacctgatcaggcccaccatg
gtggtgatcacgctcaaccagcaccggctctgggagatggtgggcaagtgggagaaaggc
atcatccacatgaagtacccggtgtggccccgctatggctccttcatgcagcccgtggtc
gacaaccgccacttgacagtggccaccctggaggagagaccctttgtgattgtggagaac
acagaccccagcacgggggtctgtgtgcgcaacaccgtgccctgccgcaagcagaccaac
tcctcccacagtggtaatggccttgtggatccctacaccaagctgtgctgcaaaggtttc
tgcatcgacatcctgaagaagctggccaaggcggtgaagttctcctacgacctctacctg
gtgaccaatggcaaacacggcaagatcgtccgtggggtctggaatggcatgattggtgag
gtgtactacaagcgtgcagacatggccatcggctccctcaccatcaatgaggagcggtcc
gagattgtggatttctctgtgccctttgtggagacaggcatcagcgtcatggtggcccgg
agcaatggcaccgtgtccccctccgctttcctggagccttatagcccagctgtgtgggtc
atgatgtttgtcatgtgcctcactgtggtggccatcaccgtcttcgtgtttgagtatttc
agccctgttggctacaaccagaacctcaccagcggcaagaggccaggaggtccctccttc
accattggcaagtctgtgtggctgctgtgggctctggtcttcaacaactcagtccccatc
gagaaccccaagggcaccaccagcaagatcatggtgctcatctgggccttcttcgccgtc
atcttcctcgccagctacacggccaacctggctgccttcatgatccaggagcagtacatt
gacactgtgtcggggctgagtgacaggaagttccagaggccacaggagcagtacccacct
ttccgctttggcactgtccccaacggcagcaccgagaggaacatccgcagcaactacccc
gacatgcacacccacatggtgaagtacaaccagcgctctgtggaggatgccctcaccagc
ctcaaaatggggaagctggatgccttcatctacgacgcagcagtgctcaactacatggca
ggcaaggacgagggctgcaagctggtgaccatcggcagcgggaaggtgtttgccaccaca
ggctacggcatcgccctgcagaaggactcgcgctggaagcgggccatcgacctggccctg
ctccagttcctgggagacggtgagacccagaagctggagacggtttggctgtcagggatc
tgccagaatgagaagaatgaggtgatgagcagcaagctggacattgacaacatggctggg
gttttctacatgctcctggtggccatggggctgagcctgctggtctttgcttgggagcac
cttgtctactggaagctgcgtcactccgtccccaagtcccacaagcttgacttcctcctg
gccatcagcaggggcatctacagctgcttcaatggggtgcagaccctgtcgagccctggg
cgggtgcccacacccgatgtcactgccagctcagcccaggccaacgtgctgaaaatgctg
caggcagccaaagagatggtgacaacggccagtgtaggcggctcactggagcaggccacc
cgcaccatcgaggactggagcaaccacagcgagcgcctccagaccaccttctccctgagg
acaccccagctcgtggtgcagaacagcaccggcgcacaccgggggccgccccctggcccc
gccgagaggctggggagaacctacgctcccaagggtgctcccctggggctgccgctgccc
cagcccatccccgtggactcccgtctgcacggggaggagaactggagagaggcaaacgag
cacccccacctgctacaccccctgaagtttcggggtgactgtgtaggggatgaagccctc
acaggtttcccccacctcctggtgaagactgctccaggaggggattatagggagcagatg
ctggtggggaaccatgtcggggctcccctcccgccccctacaacccccagggacctcccg
ccaccggacatctacagggagcacaagcggccgtcgggccggggggaccggctgccaaat
acccccctgctccagagggacggggctcaccggggctcagggactctgccccggctgctc
tcggcagccgagaagaagcgggaggcgggcagcgccttcctgcctccatcctgctctcgt
ggagccttcccgaaagtcagcaggacttgcagagccaggggcgagccggcgcggccggag
gcggcggtgatggagcgggagaagctgagccggtgggcgagctctgccagggctcccggg
gagcgcggcgagaagcggcgtccagcggggctgcggcgctgcggggccacccgcccgccc
gcccgcaccgacgtgcccgacctgttccccgagagcgagcccggctacggctgcggctcc
cgctgcccacaggccactggccggctgccaccgcgctcgcccgtcaccaggctgccgtcc
taccgggaggcttgccggcaaaacccccgtgccaccgccaccgtgccggcgtgcgctccc
cacgcctgcatgaactcgtacgccaacctgcccctgtacgccagacacctcgtgcggggg
tccccgccgccccgggagccctccgggctgcacccctgtgagcggggacccggacgctgg
gacagcggctgcagggactgcgggaggcgaggggagctggccttgctgcgggcggtgggg
gcggacaggagggagccgctggtggcccgcggggtggcgagtccctgcgccggcgggtcc
tggcggcgggtctccagcctggagtcggaggtgtga
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