Plasmodium malariae: PMUG01_06019400
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Entry
PMUG01_06019400 CDS
T09444
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein MSH6, putative
KO
K08737
DNA mismatch repair protein MSH6
Organism
pmal
Plasmodium malariae
Pathway
pmal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PMUG01_06019400 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmal03400
]
PMUG01_06019400 (MSH6)
DNA repair and recombination proteins [BR:
pmal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PMUG01_06019400 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PA_decarbox
AAA_29
Motif
Other DBs
NCBI-GeneID:
39867587
NCBI-ProteinID:
XP_028859850
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Position
6:507895..511794
Genome browser
AA seq
1299 aa
AA seq
DB search
MSEFNKQNSSAASNKKQASILSFFKTHESKIKKTNCSNDADINKNITGNENEYREPEGNK
LFLSNPLEEDGMKDDKENAQLNAKFSMLNNFVSNVKESDGKGLKMSNEKSSGSDNVRSNA
HSNRNSFGMSEGHQGSLFEDSLQEGSAVKSESENKMVLNSSSYYDKESAENADLSTEEDL
IIKKKRKIILDSSSDTNTNTNEKTKMGKEKRNNGEQSISDGVDGKLSFLLYEPNKKFEET
LLIDDNKCRDIKSIQRRKGEDSKKSQELDFLRNKYLNLPISLTNDKFRQYIEQYFLYCNT
FEFPKWIQPQYIRDNNLNKPESADYDCTTIWTPPSDHQWAVEYKQAHYTPGMQQFWKIKS
KNFDKIIFFKMGRFYEIFYIDACFMHTICGLNWMSGEQKPHLGFPEQSLHFYAKKVINSG
HKVVVIEQMETPKELEQRNKECSGPKDKAIKREVNEIYTKGTILHDNMLSAETKYLVCFY
FDDIEDLDNSNDRLKTKCNFGFVVTDIATSYIAVGYCNDDESRIELRTILAQLCPAEILY
CSKNINKEVLSIFKNIAADPELTSMNSFPNIIASLDEINKYFVNIPKSLEIYKEHNSVIC
AFGGFIVYLRSLLLDKKVFKFCKIEHYDLFKKDNYMVLDATALKHLEILETQSGETKNSL
YDYVNKTCTNFGARNLRRWVCSPLLNCKKINERLDVVDFLRKNEHILSLIRLKMKKLPDI
QRLLNKICVQASQSERGAVFFDNIVNTKLKEFVTFLNAFKEIDIMLTEINSIDKDDEMPS
RLFEISNTPDRRNNKNVNGSYPHIEEITKEFLQKIDFDGEKEYKPAEGCDEVIDMINRKE
KDVENQLNNILANMKKYLKISTLKFVHAKYKYEIECPDNVPKSFLKEVEITSAKKGFVRI
QNEEIKSCVEMLDDIEQEKKDAIYPFFQKIFHLFYAHYEKYIAACRLIAELDCLQSFAYV
VLNTSFVLTRPILHPMRCDNHTRVMDKGVKEEEEGTSEMEEEKGEVQNKKTDKKEKYSDE
TNDTDRGVSDTKEPLLILENNIHPVVATLMPNFIANNIYMGCEQEKKSTLLLTGPNMGGK
STLLRQAAISVILAQIGAFVPCTYCELTVVDKIFTRLGSSDNLFEGKSTFLVELEDISNL
LKQSTKYSLAILDELGRGTSSFDGTAIALSTLEQISDVIKCRCIFSTHYHMLVEEVKHNT
NISNYHMSLSIDDEQEKIIFLYKFIKGVCPKSFGIHIARLAGLPKEIIDLAHEKSVLFEN
VTDEFCKIIKYKNIMRSLLNAPDDENLASLFRKYKCEFS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtttaataagcagaattcgtcagcggcttcgaataaaaaacaagcttcaatt
ctgagtttttttaaaactcatgagagtaagataaagaaaactaactgttcaaatgatgca
gatattaataaaaatatcacaggaaatgaaaacgaatacagagaacctgaagggaataaa
ttatttttaagtaatcctttggaggaggatgggatgaaggacgacaaagagaacgctcag
ctgaacgcaaaattttctatgctgaataattttgtgtcaaatgtgaaggaaagcgatgga
aaggggctgaagatgagcaatgaaaagagcagcggaagtgacaatgtgagaagcaatgcg
catagcaacaggaacagctttggcatgagcgaggggcatcaaggaagtctatttgaagat
tccttacaggagggaagtgcagtaaaaagcgagagcgaaaataagatggtgctgaatagt
agcagttactatgataaagagagtgcagaaaatgcagatctaagcacagaagaggatctt
attataaaaaagaagagaaagataatacttgatagctcaagtgatacaaatacaaacaca
aatgaaaagactaaaatgggaaaggaaaaaaggaataatggggaacagtcaattagcgat
ggtgttgatgggaagttaagttttttactatatgaaccaaataaaaaatttgaagaaact
cttttaatcgatgataataaatgtagggatattaaatcaatacaaagaagaaaaggagaa
gatagtaaaaaatcgcaagagttagatttcttaagaaataaatatttaaatttacctatc
agtttaacaaatgataaatttagacaatatatagaacagtattttttatattgtaataca
ttcgaatttccaaaatggattcaacctcagtatataagagataataatttgaacaaacca
gagagtgctgactatgattgtacaaccatatggactccaccatcagatcatcaatgggca
gtggagtataaacaagcacattatactccaggtatgcagcaattttggaaaataaaatct
aaaaattttgataaaataattttttttaaaatgggaaggttttatgaaatattttatatt
gatgcttgttttatgcatactatatgtggacttaattggatgagtggtgagcagaaacct
cacttgggatttccagaacagtctttacatttttatgcaaaaaaagtaattaatagtggt
cataaagtagttgtaattgagcagatggaaacacctaaagaacttgaacaaaggaacaaa
gaatgctctggacctaaagataaagctatcaaaagagaggtcaatgaaatatatactaaa
ggcacaatactacatgataatatgttaagtgctgagaccaaatatttagtttgtttttat
tttgatgatatagaagatttagataattctaatgatagattaaaaacaaagtgtaacttt
ggttttgttgtaacagatattgcaacgtcttacattgctgtagggtattgtaatgatgat
gaatcgagaatagaattaaggaccattcttgcacaattatgtccagcagaaattttatat
tgttcgaaaaatataaacaaagaagtgttatccatatttaaaaatattgcagcagatccg
gagttgactagtatgaatagttttcctaatatcatcgcatcgttagatgaaataaataaa
tatttcgttaatattcctaaaagtttggaaatatataaagaacacaatagtgttatttgt
gcttttggaggatttatagtatatcttagatcccttcttttagataagaaagtctttaag
ttttgcaaaattgaacattacgatttatttaagaaagacaattatatggttctggatgca
actgccttaaagcatttggaaatattagagactcagtcaggagaaacgaaaaattcctta
tacgattatgtgaataaaacttgcacaaattttggtgctcgtaatttgaggagatgggta
tgtagtcctttattgaattgtaaaaaaattaatgaacgattagatgttgtagattttttg
agaaaaaatgaacacatattatcattgataaggttaaagatgaagaaactacctgacata
caaaggttattaaacaaaatatgtgttcaagcatctcaaagtgaaagaggagctgtcttc
tttgataatattgttaatacaaaattgaaagaatttgttacattcttaaatgcattcaaa
gaaatagatataatgttgactgaaattaacagcattgataaggatgatgaaatgcctagt
cgcttattcgaaattagtaatacacctgacaggaggaataataaaaatgtgaatggttca
tatcctcatattgaagaaattacaaaagagtttttacaaaaaatagattttgatggggaa
aaagaatataaaccagcagaaggatgtgatgaagtaatcgatatgataaatagaaaagaa
aaggatgtagaaaatcaactaaataatatattagcaaatatgaaaaaatatttgaaaata
tcaacattaaaatttgtgcatgcaaaatataaatacgaaattgaatgtccagataacgtt
ccaaaatcttttttaaaagaagttgaaataacatctgctaaaaaaggatttgttaggata
caaaatgaagagataaaaagttgtgttgaaatgttagatgacattgaacaggaaaagaaa
gatgccatttatccattttttcaaaaaattttccacttattttatgcacattatgaaaaa
tatattgctgcatgcaggctaattgcagaactagattgtttgcaatcctttgcatatgta
gtattaaacacttcattcgttttaacaagacctatacttcatcccatgcgatgtgataac
catacaagggtgatggacaaaggggtaaaggaagaagaggaaggaacatccgaaatggag
gaagaaaagggagaagttcaaaataaaaaaacagacaagaaggaaaaatattcggatgaa
acaaatgatacagatcgaggtgttagtgatactaaagaacctttgctcatccttgaaaac
aatattcacccagttgttgcaaccctcatgccgaactttattgcaaacaatatttatatg
ggatgtgagcaggaaaaaaaatcaactttattattaacgggaccaaatatgggaggtaaa
agtaccttactgcgtcaggcagctatatctgttatattagcacaaataggtgcctttgtt
ccttgtacatattgtgagttaacagtagtagataagatatttacaaggttaggatcaagt
gataacttatttgaaggaaaaagtacatttctagttgagttagaggatatatcaaatttg
ttaaaacagagtactaaatacagtttagccattttagatgaactgggtagaggaacctca
tcctttgatggcacagcaattgctttgtctacacttgaacaaatatctgatgttataaaa
tgtagatgcatcttttcaactcattaccatatgctagtagaagaagtcaaacataataca
aatatttccaactatcatatgagcttaagtattgatgatgaacaggagaaaattatattt
ttatacaaatttattaaaggagtatgtcctaaatcatttggaatacacattgcaaggtta
gctggacttccaaaagagatcattgatcttgcacatgagaaatcggtactatttgaaaat
gtaactgatgaattttgcaaaattattaaatataaaaatataatgcgttctttgttaaat
gcgcctgatgatgaaaacttggcttctttgtttcgaaagtataaatgtgaattttcgtga
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