Pseudomonas marincola: PMYSY11_0579
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Entry
PMYSY11_0579 CDS
T07318
Symbol
trmA
Name
(GenBank) tRNA m(5)U54 methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pmao
Pseudomonas marincola
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmao03016
]
PMYSY11_0579 (trmA)
Enzymes [BR:
pmao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PMYSY11_0579 (trmA)
Transfer RNA biogenesis [BR:
pmao03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PMYSY11_0579 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_4
Cons_hypoth95
Methyltransf_15
MTS
RrnaAD
DREV
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
CAE6889867
LinkDB
All DBs
Position
PMYSY11:complement(632790..633884)
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AA seq
364 aa
AA seq
DB search
MSAPQFDPAVYATQLEEKKQRLIDLLAPFGAPEPQVFDSAREHYRLRAEFRLWREGEDRH
YAMFAQGDKHTPILLEDFPIASRRINQLMPRLKAAWHGSKVLGFKLFQAEFLTTLADDAL
ITLCYHRPLDEEWQAEAEKLAAELQVNIVGRSRGKRIVIGRDFVEEKLTVAGRVFTYRQP
EGAFTQPNGEVNQKMLNWAYEALGERQDDLLELYCGNGNFTLPLATRVRKVLATEISKSS
VYAALANLADNAVDNVTLVRLSAEELTEALNEVRPFRRLAGIDLKSYEFGSVFVDPPRAG
MDPDTCELTRRFERILYISCNPETLAENIAQLSDTHEITRCAMFDQFPYTHHMESGVLLT
RRKA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccacaattcgacccagcggtttacgccactcagctggaagagaagaagcaa
cgactgatcgacctgctcgccccttttggtgcacctgagccgcaagtattcgattccgcc
cgtgaacattaccggctgcgcgccgagttccgtctgtggcgcgaaggtgaagaccgtcac
tacgcgatgttcgcgcagggagacaagcacacgcctattttgctggaagatttccccatc
gccagccgccgcatcaatcaactgatgccgcgactcaaagcagcctggcacggcagcaag
gtgttgggtttcaagctgttccaggctgagttcctgaccacattggcggatgatgcgctg
atcactctgtgctatcaccggcctctggatgaagagtggcaagccgaggctgaaaagctc
gcggccgagcttcaggtcaatatcgtcggccgctcgcggggtaagcgcattgtcattggc
cgcgactttgtcgaagagaaactgaccgttgcgggccgggttttcacctatcgccagccg
gaaggcgcgtttacccagcccaacggcgaggtcaaccagaagatgctcaactgggcatat
gaagcccttggcgagcgtcaggatgacttgctggaactgtattgcggcaatggcaacttc
accctgccgttggcaactcgggtccgtaaagtgctggcgaccgagatcagcaaatcatcg
gtgtacgcggcattggccaaccttgccgacaacgcggtggataacgtcacgctggtgcgt
ttatctgcagaagagctgaccgaagcgctgaatgaggttcgcccgttccgccgcctggct
ggcatcgatctcaagagctatgagtttggcagtgtatttgtcgatccgccgcgtgccggc
atggaccccgacacctgcgaactgacccgtcgcttcgaacgtattctgtatatctcgtgc
aacccggaaacgctggccgagaacattgcccaactcagtgatactcacgagatcacgcgc
tgcgcaatgtttgaccagtttccctacacccaccacatggaatcaggcgtactgctgact
cgccgcaaggcctga
DBGET
integrated database retrieval system
