Planctobacterium marinum: MACH26_01980
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Entry
MACH26_01980 CDS
T09721
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw00071
Fatty acid degradation
pmaw00280
Valine, leucine and isoleucine degradation
pmaw00310
Lysine degradation
pmaw00362
Benzoate degradation
pmaw00380
Tryptophan metabolism
pmaw00410
beta-Alanine metabolism
pmaw00640
Propanoate metabolism
pmaw00650
Butanoate metabolism
pmaw00907
Pinene, camphor and geraniol degradation
pmaw00930
Caprolactam degradation
pmaw01100
Metabolic pathways
pmaw01110
Biosynthesis of secondary metabolites
pmaw01120
Microbial metabolism in diverse environments
pmaw01200
Carbon metabolism
pmaw01212
Fatty acid metabolism
Module
pmaw_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MACH26_01980 (fadB)
00650 Butanoate metabolism
MACH26_01980 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
MACH26_01980 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MACH26_01980 (fadB)
00310 Lysine degradation
MACH26_01980 (fadB)
00380 Tryptophan metabolism
MACH26_01980 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MACH26_01980 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MACH26_01980 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MACH26_01980 (fadB)
00930 Caprolactam degradation
MACH26_01980 (fadB)
Enzymes [BR:
pmaw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MACH26_01980 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MACH26_01980 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MACH26_01980 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
MACH26_01980 (fadB)
BRITE hierarchy
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BDX04677
UniProt:
A0AA48HLI7
LinkDB
All DBs
Position
complement(216923..219073)
Genome browser
AA seq
716 aa
AA seq
DB search
MLFEGQCLQASLNENGIADIVFNAQGSVNKFDQQTVSELNDLCAALEKNSDIKAAVVRSA
KSTFIVGADITEFTGLFAEPEEKLLEWVANTSQVFDRFEDLPFPTVAAINGFALGGGCEM
TLACDLRVADTTAAIGLPEVKLGLMPGFGGTVRLPRVIGADNAMEWMTTGKDRNAEKALN
EGAIDAATAPEQLVAVANQMAADAAAGDIDWQARRAAKKAPLKLNRNEMMMSFATAKGMV
FAQAGKHYPAPHMVVETLEKAATLDREGALKLENAGFVKLAKSEAATAQVGIFLADQVVK
GKGKKQAKSATKKFEQAGVLGAGIMGGGIAYQSAVKGTKTIMKDIAEPALQLGLDEASKI
LDKGMKRGKVSSKKMAATLNNIVPTLDYKALENVDIVIEAVVENPKVKGIVLKETEETVA
DDAIICSNTSTISINALAENLSKPERFCGMHFFNPVHRMPLVEIIRGEKTSEETIANVVA
MTLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLLDGADFVAVDKVMEKIFGWPMGPAF
LLDVVGIDTADHAADVMADGFPERMKKVDNDPVTLLYKAERYGQKNQKGFYNHGLDKRGK
PQKTPAEEAYELMSAHVADKKDFDAEEIIARLMIPMANEAIRCLEEGIVDSAAEADMALL
YGLGFPPFRGGIFRYIDTMGVANFVALADKFAHLGEVYQVTDGAREMAKNNQKYCG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgaaggccaatgcctacaagccagcctgaatgaaaacggtatcgctgatatt
gttttcaatgcgcaaggctccgtcaacaaattcgaccaacaaactgtatcagaactcaat
gatttatgcgctgcacttgaaaaaaatagtgacatcaaggccgcagtagttcgttctgca
aagtccacctttattgtaggtgcggatattactgagttcaccggactatttgccgagccc
gaagagaaattgctcgagtgggtggccaatacgtcccaagttttcgaccgttttgaagat
ttacctttcccgacagtggccgcgataaatggctttgctttgggcggtggttgtgaaatg
acattagcctgtgatctgcgagttgctgacactactgcagccatcggactaccagaagtg
aagttaggcctgatgccgggttttggtggtaccgtgcgtttaccgcgcgttatcggtgcc
gacaacgcaatggaatggatgactactggtaaagatcgcaatgcagaaaaagcccttaac
gaaggcgctattgatgccgcgactgcgccagagcaattagtcgccgttgctaaccagatg
gctgctgatgctgctgcgggtgatattgactggcaagcgcgtcgcgccgctaaaaaagcc
ccactgaaactgaaccgcaacgaaatgatgatgagtttcgctacagcaaaaggcatggtg
ttcgcgcaagcaggtaaacattatccagcgcctcacatggtagtagaaacactggaaaag
gccgcgacacttgaccgtgaaggcgccttgaaactggaaaatgccggtttcgtaaaactc
gccaaatcagaagctgccacagcgcaagtaggtatcttcctggcagaccaggtagtaaaa
ggcaaaggcaaaaaacaagcaaaaagcgctaccaagaaatttgaacaagcaggtgtgtta
ggggccggtatcatgggcggtggtattgcataccagtcagctgttaagggtaccaaaacc
atcatgaaagacattgccgagcctgctttgcaattgggtttggatgaagccagcaaaata
cttgataaaggcatgaagcgtggcaaagtgtctagcaagaaaatggcggccacgctcaat
aacatcgttcccacgttagattacaaagcgctggaaaatgtcgatatcgttattgaagcg
gtggtagaaaatccaaaagttaaaggcattgtgttgaaagaaacggaagagacagtggct
gatgacgccattatctgttctaacacgtccaccatttccatcaacgccttagctgaaaac
ctgagtaaaccagagcgcttctgtggtatgcacttcttcaacccagtgcacagaatgcct
ttggtagagatcatccgcggcgaaaaaacctcagaagaaaccatcgctaacgtagtagcc
atgactctgaagatgggcaaaacccctatcgtcgtaaacgactgtccgggattcctggtt
aatcgcgttttattcccttacttcgcgggcttcagcaagttgttgctagacggtgccgat
tttgttgccgttgataaagtaatggaaaaaatcttcggctggccaatgggacctgccttc
ctgctggatgtagtgggtattgatactgcagatcacgcagcagatgtaatggccgatggc
ttccctgagcgcatgaagaaagtggacaatgatccggtaacccttctttataaggcagag
cgctacggtcagaagaatcagaaaggcttctacaatcacggtttggacaaacgcggcaaa
ccgcaaaaaacaccagcagaagaagcttacgagttaatgtcagcccatgtagccgataag
aaagactttgatgctgaagagatcattgcacgtctgatgatcccgatggctaacgaggcg
attcgctgtctggaagagggtatcgtggattcagcagccgaagcagacatggcgttgttg
tacggtctgggcttccctccattcagaggcggcatcttccgttacatcgacaccatgggc
gtcgcgaattttgttgccctagctgacaagtttgcccaccttggcgaagtataccaggtg
accgacggtgccagagaaatggccaaaaacaaccagaaatactgcggataa
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