Planctobacterium marinum: MACH26_20030
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Entry
MACH26_20030 CDS
T09721
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmaw03009
]
MACH26_20030 (rimO)
Enzymes [BR:
pmaw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MACH26_20030 (rimO)
Ribosome biogenesis [BR:
pmaw03009
]
Prokaryotic type
ribosomal protein modification factors
MACH26_20030 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
BDX06482
UniProt:
A0AA48KRU5
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All DBs
Position
complement(2258646..2260061)
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AA seq
471 aa
AA seq
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MTVKQFDPTQTTTMDTPKKVIEQQSQESTVIEGGNARVGFVSLGCPKNLVDSERILTQLR
TEGYDVVPTYNDADLVIVNTCGFIDSAVQESLDTIGEALAENGKVIVTGCLGVKEDEIRE
VHPNVLAITGPHAYETVVEQVHDNLPKPTHNPFEDLIPEQGVKLTPRHYAYLKISEGCNH
RCTFCIIPSMRGDLVSRPVGEVLSEAERLSNAGVKELLVISQDTSAYGVDVKNKTGFWDG
MPVKTGMTELAEQLGHMGVWVRLHYVYPYPSVDKVIPLMAQGKVLPYLDIPFQHANKRIL
KLMKRPTAAERTLERIKKWREICPELVIRSTFIVGFPGETEEEFQELLDFLDEAQLDRVG
CFKYSEVEGAVANDLPDPVDEATKQDRYERFMLKQQKISADRLQQRVGLIMQVLIDEVDE
EGAIGRTYADAPEIDGVVYLNGDTSVQPGDFVDVLIEHADEYDLWGSRVEE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaaaacaatttgatcctacacaaaccaccaccatggacacccctaaaaaggtg
atcgaacagcagtctcaagagagcaccgttatcgaaggtggcaatgcacgtgtgggtttt
gtttctttgggttgccctaaaaacctggtggactcagagcgcattcttacccaactgcgc
accgaaggttatgacgtggtacccacatataacgacgcggatctggtgatcgtaaacacc
tgtggttttatcgattctgcggttcaggagtctttggataccatcggtgaagccttagca
gagaatggcaaggtcatagtaaccggctgtctgggtgttaaagaggatgaaattcgggaa
gttcaccccaatgtattggccatcactggcccccatgcttatgagacggtggttgagcag
gtacacgataatctacctaagcctactcataatccctttgaagatttgatcccggagcaa
ggagtcaaactcacgccacgtcattatgcctacctcaagatatccgaaggttgtaatcac
agatgtactttttgcatcatcccttcaatgcgtggcgacctggtcagtcgtcctgtgggt
gaagtattgagcgaagccgaacggttaagtaatgccggggtaaaagagctgttggttata
tcccaagataccagtgcttatggtgtggatgtaaaaaacaaaaccggattttgggatggc
atgccggttaaaaccggaatgacagaactggccgagcaactgggccatatgggcgtttgg
gtgcgtttgcactacgtatacccctatccttccgtagataaggttattccgttgatggcg
caaggcaaagtcctgccttatctggatatccccttccagcacgccaacaagcgtatttta
aaattaatgaaacgcccgactgccgctgagcgcactctggagcgcatcaaaaaatggcgt
gagatctgtccggaattagtgatccgctccaccttcattgtgggcttccccggtgagaca
gaagaagaattccaggaattattggacttcctggacgaggcgcaattagacagagtgggc
tgttttaaatattcagaagtggaaggcgctgtggccaacgacctgccagatccggttgat
gaagctaccaagcaagaccgttacgaacgctttatgttgaaacaacaaaagatcagtgct
gatcgtctgcaacagcgtgttggtttgatcatgcaagtattgattgatgaggtggatgaa
gaaggcgcgataggccgaacctatgccgatgcacctgaaattgatggcgtggtgtatcta
aacggtgacacttcagtgcagcctggcgattttgttgacgtgctcatcgaacacgccgat
gagtatgacctttggggtagtcgcgtagaagaataa
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