Pecten maximus (king scallop): 117316548
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Entry
117316548 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117316548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117316548
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117316548
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
117316548
NCBI-ProteinID:
XP_033727077
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All DBs
Position
18:1989404..2055193
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AA seq
1366 aa
AA seq
DB search
MGPKQTPAKKGNTLFSYFNKSPSVKHASTPKTGDADILSPKRSPNQKDPTSTGSLTPTSK
QTADDGGVVGGDLVWAKLEGYPWWPSLVCTHPTDNIHYKKGKNPQVHVQFFDDPVSRAWI
KAKYVQPFKGSDDKEYQRGGQFFSHNPKVKQGTCEADKAMALTTEDRLKLVVELQPSDNE
DEEESMDLDPDIFDDEIDEETDNSKENVSTTEDDKKKPSKSPRKTPKKDSHRRSTRTPKP
KRRRIVESHDSEEESGDEFKLKEDSDEANFSSEDEESSGVDEDDVSDIETGSEPESPIKA
PQKRKRPPPKSKPAAKQNDSPDTTTPSLNSFSSGSKPTFTPTVGDKTKSRLAAFTAADSP
STSKPALTEQEANFPHLKLDFLQPHKIKDAKMHDRTDPEYDPKTLHIPESFKKSTTPAMR
QWWELKSKYFDSILFFKMGKFYELFHMDAVIGVNELGIIFMKGEQAHSGFPEIAYNRYAE
TLIQKGYKVVRIEQTETPDMMNDRLKASSKQTTKFDKVVKREVCRVTTKGTQTFSFMDGD
CSGAQNNFLLAIAEKEGAVEGCSIFGVCFVDTSIGKFYVGQFADDRHCSRLRTLIAHYTP
SQVLFERNKMTPKTQLVLKNNLTFVSKEGLTSGSEFWDSSKTLKRLAEEDYFKVNDKFVW
PATIKKMISETDALGLTPGDDYNLAIRALGAVTWYLQYSLLDQELLSMNNFEEYSPLDDA
EVKECKKETFGGRQHMVLDGVTLANLDITENSASGTLEGTLLEQLDHCNTPFGRRLFRQW
LCAPLCNPASINDRLDAVDDLIGCPDLVATTAEIIKKLPDLERLLNRIHSLGSASRSKNH
PDSRAIMFDEAKYSKKKIEDFLLTIEGFRTISKVAKKFQGHTKNFKSKLLSKTMTLQGDE
SEGCFPDLHDDIEFFEHSFDHNKAKKDGVIVPNKGVDEDYDQAISDIQATERSLNLYLDR
QRTRLGCKAMTFWGTGKNRYQMEVPESALKRVPDNYELFSSKKGWKRYRTSEIDEYLSEL
ADAEERKDSALKDTMRRIFHSFDERYKAWEVALQCISVLDVLMSLASYSRCGDGVMCRPE
LISPDGDIQPFLEIRDGRHPCIAKTFTGGDFIPNDTLIGLKDDNEMETEEEEYNADSQVI
LVTGPNMGGKSTLMRQVGLITVIAQMGCYVPAEKCRMTPVDRVFTRLGATDRIMAGESTF
FVELSETSAILQHATRHSLVLMDELGRGTATYDGTAIACSVVNELSRRVCCRTLFSTHYH
SLVEEFSHDPNIRLGHMACMVENEDETDPTQETITFLYKLSHGACPKSYGFNAAKLANIP
DEIIRVAVKKSREFEENTTRLRLVRSLYQECSGEKLVSLQQQIRDV
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgaaacagacaccagcaaagaagggaaacacgctgttttcttatttcaacaaa
agtccatctgtaaagcatgcttccacgcccaaaactggtgatgcggacatattgtcacct
aagcgatcgcccaaccagaaggacccgacgagcacagggtccctgactccgacaagtaaa
caaacagctgatgacggaggtgttgttggtggtgatctggtttgggccaaactggaaggc
tacccttggtggccatcattggtatgtacccacccgactgataacatccactacaaaaag
ggcaagaacccccaggtccacgtccagttcttcgacgaccctgtctcgagagcctggata
aaggccaagtatgtccagcccttcaaagggtcagatgacaaggagtatcaacgaggcggt
cagtttttctcccacaacccgaaggtaaagcaaggcacctgtgaggcagacaaggctatg
gctctgaccacagaggatagactgaaactagttgtggagctccagccctcggacaacgag
gatgaagaagagagtatggatttggatccggacatatttgatgatgaaattgatgaagag
actgacaacagcaaggaaaatgtcagcacaacggaggatgataaaaagaaaccatccaag
tctccaagaaaaactccaaagaaagattctcatcgacggtcgacacggacgccgaaaccc
aaacgaaggcgaattgtggaaagtcatgacagtgaggaggaatcgggtgatgaattcaaa
cttaaagaggactctgatgaggcaaactttagcagcgaagatgaggaaagcagtggtgtc
gatgaagacgatgtctctgatatagaaacaggctccgaaccagaatctcccatcaaggct
ccccagaagagaaaacgacctccgcccaaatctaaacctgcagccaagcagaatgatagc
ccagacacaactactccctccctcaacagcttttcctccggcagtaaaccgacattcaca
ccaactgttggagacaagaccaagtcgaggctggctgcatttacagcagctgatagtccg
agtacatctaaacctgcacttacagaacaggaggccaactttcctcatctcaaactcgac
tttctccaaccacacaagatcaaagatgctaagatgcacgatagaactgaccccgaatac
gaccccaaaacactccacattccagagagtttcaaaaaatctactacaccggcaatgagg
cagtggtgggaactgaagtcaaagtatttcgactccattctcttcttcaagatgggaaaa
ttttacgagcttttccacatggatgctgtaataggggtgaatgagcttggaataatattc
atgaagggagaacaagcacactcaggatttcccgagattgcctataacagatacgcagaa
acacttatacagaaagggtacaaggtggtccgcatcgagcagacggagactccggatatg
atgaatgaccgcctcaaagcttcatccaaacaaacaaccaagttcgacaaagttgtaaag
cgagaggtttgtcgtgtaacaaccaaaggtacacagactttcagcttcatggacggtgac
tgcagtggtgctcagaataatttcctcctcgccattgcagagaaggagggggctgtagaa
ggctgcagtatcttcggggtctgttttgtagacacgtctatagggaaattctacgtaggt
cagtttgctgatgaccggcactgctccagattgcgaactctgatagcgcactacacccct
tcacaggttttattcgaaaggaacaaaatgacaccaaagacacaattggtacttaaaaac
aacctgacatttgtgtcgaaggaaggcttgacatctgggtcagagttctgggacagttcc
aaaaccctcaaacgcctggctgaggaggattatttcaaagttaacgacaagtttgtgtgg
ccggctactatcaagaaaatgatttctgaaacggacgctctaggactgacccctggagat
gactacaatctggctatacgggcattgggagctgttacgtggtaccttcaatacagcctg
ctggaccaggaactcctctccatgaacaattttgaagagtactctcccttggatgatgct
gaagtgaaggagtgtaaaaaagagacatttggaggtcgtcaacacatggtgctggatgga
gtgaccctagctaacctggacatcacggagaactcggccagtgggacactggaggggacc
ctactggaacagcttgaccattgtaataccccatttggccgtcgtttgttccgacagtgg
ctctgtgctccgctttgtaatccagcctccattaatgatcgtctggacgctgttgatgat
ctgattggctgtccagatttagttgctacgacagcagaaattataaaaaaattacctgac
ttggagcgattattaaatagaatccacagtttaggatcggcgtccaggagtaaaaaccat
ccggattcccgtgctattatgtttgatgaggccaaatacagtaagaaaaagattgaagac
ttcctgttgacgatagagggattcagaaccatatctaaagtggccaagaagtttcaaggt
cataccaagaacttcaagtccaaattgttatcaaagactatgacgctacagggcgatgag
agcgaaggatgttttcctgatctccatgacgacatagagttctttgagcattcatttgac
cataataaagccaagaaggatggagtgattgtacccaacaaaggtgtggatgaagactat
gatcaagccatttcagacattcaggccactgagcggtcactcaatctttatcttgaccga
cagcggactcgactgggctgtaaggcgatgacattctggggtacgggaaagaatcggtat
cagatggaagtccctgagagtgcattaaagagagttcccgataattacgagcttttctcc
tcaaagaagggatggaagcggtacaggacatcagaaatagacgaatatttgtcagaactc
gcggatgctgaggaaagaaaagattcagcgttaaaagatacgatgcgaagaatcttccac
agttttgacgagaggtacaaggcgtgggaagtggctcttcagtgtatatcggtgctggat
gttcttatgtcgctggcctcctatagtcggtgtggggacggagtcatgtgtcgaccagaa
cttatctcccctgatggcgatatacagccattcctggagatccgagatggacgtcatcca
tgtatagcgaagacctttactggtggagacttcatacctaacgatactcttatcggcctg
aaggatgacaatgaaatggagaccgaggaagaagaatacaatgctgacagtcaagtgatt
ctggtgaccggaccaaatatgggcggtaaatcaacgctgatgagacaagtgggtctcatt
accgtaatagcccaaatggggtgttacgtaccagctgagaagtgccgtatgacgcctgtg
gatcgtgtatttaccagacttggagccacagacagaattatggctggtgagagcaccttt
tttgtggagttgagcgagacttcggctatcttacagcatgccacacgacattccttagta
ctcatggatgaactaggaagaggcacagctacttatgatggaacggctattgcctgttcc
gttgttaatgagctctccagacgagtttgctgtcgcacgcttttctccacacactaccat
tcattggttgaggagttttcacatgaccctaacatccgactgggtcacatggcatgtatg
gtggagaatgaagatgagaccgaccctacccaggagaccatcaccttcctctacaaactc
tctcacggagcatgtcccaaaagttacggcttcaacgcagcaaaattagccaacatccct
gacgagataatccgagtggcagtaaaaaaatcgagggagttcgaagagaacacaacacga
ctccggcttgtcagatcactctatcaggaatgttcaggggaaaagttagttagcctacaa
caacagattcgggatgtgtga
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