Pseudomonas mediterranea: E3Z27_00155
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Entry
E3Z27_00155 CDS
T08284
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed03030
DNA replication
pmed03410
Base excision repair
pmed03420
Nucleotide excision repair
pmed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3Z27_00155 (polA)
03410 Base excision repair
E3Z27_00155 (polA)
03420 Nucleotide excision repair
E3Z27_00155 (polA)
03440 Homologous recombination
E3Z27_00155 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmed03032
]
E3Z27_00155 (polA)
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_00155 (polA)
Enzymes [BR:
pmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3Z27_00155 (polA)
DNA replication proteins [BR:
pmed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E3Z27_00155 (polA)
DNA repair and recombination proteins [BR:
pmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E3Z27_00155 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3Z27_00155 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
QHA80202
LinkDB
All DBs
Position
34212..36980
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDALYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSSLDVAGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKALPAKLEEHKEM
AFLSYELATIKTDVPLDVGLDDLQMGPPDHEKLAELYTLLEFKSWFEENQRDAKRVGQEV
VEVADEQPGGAEAKYEVILDQARFDAWLAKLEQAPLFAFVTEANGDDPQHAQLVGLSFAV
AAHEAAYIPLTHSYMGVPEQLDRDTVLKALKPLLENPDKRKVGQHAKFETNILANCAIGG
DQDNGILVQGVAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQDIAGKGVKQLTFD
QISLELAGPYAAEDADVTFRLHQALQEKLAAIPSLGKVLNEIEMPLMPVLARIERQGALV
DANLLGVQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNDLDVHRATAAEVFGVELEAVSHDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLEYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDRWLSTSGLDARVILQVHDELVLEVREDLVEQVSKDIRQHMSA
AATLDVPLLVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcttcttatctgtaccgcgcgtttcac
gcgctgccaccgctgaccacgtccaaaggcctgccgaccggcgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtatccggacagcccgtttgccgtggtgttcgac
gccaagggtgggacgtttcgcgatgcgctgtacgccgagtacaaggccaatcgcccgagc
atgcccgatgacatgcgcgtgcagatcgagccgctgcacgccagcgtcaaggccctgggc
ttcccgctgctgtgtgtggacaacgtcgaagccgacgacgtgatcggcaccctggcccgc
agcagcgccgcagccgaccgcccggtggtgatctccaccggtgacaaggacatggcgcaa
ttggtcgacgggcacattaccttggtcaataccatgaccggtagctcgctggacgtggct
ggcgtaaaggagaaatttggtgtcgctccggagcagatcatcgattatctggcgttgatg
ggcgattcttccgacaacatcccgggcgttccgggcatcgggccaaagaccgcctccggc
ttgctggtgggggtcaacggcgggctgaccgagctgtatgcgcaactggacatcgtcccc
acgttgccgattcgtggtgccaaggccctgccggccaagctcgaagaacacaaggaaatg
gcgtttctttcctacgaactggccaccatcaagactgacgtgccgctggatgtcggcctc
gatgacctgcaaatgggtccaccggaccacgaaaaacttgccgagctgtacaccctgctg
gagttcaagagctggttcgaagaaaaccagcgggacgccaagcgtgtcggccaggaagtc
gttgaagtggccgacgaacagcccggtggcgccgaggcgaagtacgaagtcattctcgat
caggcgcgcttcgacgcctggctggccaagctcgagcaagcgccgctgtttgcgttcgtc
acggaagccaacggtgacgatccccagcatgcgcaactggtcgggttgtcgtttgccgtg
gcggcccatgaagcggcctacatcccgctgacccattcctacatgggcgtgccggagcag
ctggatcgcgacacggtgctcaaggccctcaagcccttgctggaaaatcccgacaagcgc
aaggtcggccagcacgccaagttcgagaccaacatcctggccaactgcgccattggtggt
gatcaggacaacggcatcctggtccagggcgttgccttcgacaccatgctcgaatcctac
gtgctggactccaccgcgacccgtcacgacatggacagcctggcgctcaaatacctgggg
caaagcaagaccgatttccaggacatcgccggcaaaggagtcaaacagctgactttcgac
cagatctccctggaactggccggcccgtacgccgctgaagatgccgacgtaaccttccgt
ttgcaccaggccttgcaggaaaaactggcggcgatcccgagcctgggcaaggtgctcaat
gaaatcgagatgccgctgatgccggtgctggcgcgtatcgagcgccagggtgcgttggtg
gatgccaacctgttgggtgtgcagagcgtcgagctgggcgagaaactggtggccctggag
cgtgaggcgttcgccatcgctggagaggaattcaacctcggctcgccgaagcaattgggc
gtgatcctgtatgaaaaactcggtttgccagtgctcagcaaaaccgccaagggccaggca
tccaccgccgaagcggtgctcgccgaactggcggagcaggattacccgctgcccaaggtg
ctgatgcagtaccgctcgctgagcaagctcaagagtacctacaccgatcgcctgccggag
cagatcaacagccgcaccggccgcgtccacaccaattaccagcaagccgttgccgcgacc
ggacgcctgtcgtccatcgacccgaacctgcagaacattccgatccgtaccgccgaaggt
cgacggatccggcaagcgttcgtggcgccgaaaggctacaagctgctggcggcggactat
tcgcagatcgagttgaggatcatggcgcacctggccaaggatgaaggtctgctccatgcg
ttccgcaacgacctggacgtgcaccgggccactgccgccgaggttttcggcgtcgagctg
gaggccgtcagccatgaccagcgccgcagcgccaaggcgatcaacttcggcttgatctac
ggcatgagcgcttttggtctcgccaaacagatcggcgtcgaccgcaagcagtcccaggcc
tacatcgaccgctacttcgcccgctatccgggtgtgctggagtacatggagcgcacccgc
gcccaagccgccgaacaggggttcgtcgaaaccattttcggccgccggctgtacctgccg
gacatcaatgcgaagaatccggcactgcgcaagggggctgagcgcacggcgatcaacgca
ccgatgcaaggcaccgctgccgacatcatcaagaaagcgatggtggccgtggatcgctgg
ttgtcgacctcagggctggatgcccgggtcatcctccaggtgcacgacgaactggtgctg
gaagtacgagaggatctggtcgaacaggtcagcaaggacatccgccagcacatgagcgcc
gccgccacgctggacgtgccgttgctggtggaagtgggcgtgggcaacaactgggatgag
gcgcactga
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