Pseudomonas mediterranea: E3Z27_20105
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Entry
E3Z27_20105 CDS
T08284
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00020
Citrate cycle (TCA cycle)
pmed00640
Propanoate metabolism
pmed00660
C5-Branched dibasic acid metabolism
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
pmed01120
Microbial metabolism in diverse environments
pmed01200
Carbon metabolism
Module
pmed_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmed_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E3Z27_20105 (sucD)
00640 Propanoate metabolism
E3Z27_20105 (sucD)
00660 C5-Branched dibasic acid metabolism
E3Z27_20105 (sucD)
Enzymes [BR:
pmed01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
E3Z27_20105 (sucD)
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Gene cluster
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QHA83807
UniProt:
A0A6I6QJV6
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All DBs
Position
complement(4653780..4654664)
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AA seq
294 aa
AA seq
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MSVLINKDTKVICQGITGSQGSFHTQQAIEYGTKMVGGVTPGKGGTEHLGLPVFNTVKDA
VAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDELGITLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAFIKANVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTGWEMKK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaacaaagacaccaaggttatctgccagggtattaccggttcgcaa
ggtagtttccacacccagcaagccatcgaatacggcaccaagatggttggcggcgtaact
cccggcaagggcggcaccgagcacctgggcctgcctgtcttcaacaccgtcaaagacgct
gttgcagccactggcgccaccgccagcgtgatctacgttccggctcctttctgcaaggat
tccatccttgaagcagcgttcggcggcatcaagctgatcgtctgcatcaccgaaggcatc
ccgaccatcgacatgctggaagccaaggtcaagtgcgacgagctgggtatcaccctgatc
ggtcctaactgcccaggcgtgatcactccaggcgaatgcaagatcggcatcatgccaggt
cacattcacttgccaggcaaggtcggtatcgtttcccgttccggcaccctgacctacgaa
gccgtgaagcagaccactgacgccggtttcggtcagtcgacttgcgtcggcatcggcggt
gacccgatcccgggctcgaacttcatcgacatcctgaagctgttccaggaagacccgaag
accgaagcgatcgtcatgatcggtgagatcggcggttcggcggaagaagaagcggctgct
ttcatcaaggcaaacgtgaccaagccggttgtttcctacatcgcaggtgtgactgctcct
ccgggcaagcgcatgggccatgctggcgcaatcatctctggcggcaaaggcactgcagac
gagaaattcgctgctctgcaagacgcaggcgtgaaaaccgtgcgttcgctggcagacatc
ggcaaggccctggccgagctgactggctgggaaatgaagaagtaa
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