KEGG   Pseudomonas mediterranea: E3Z27_25120
Entry
E3Z27_25120       CDS       T08284                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pmed  Pseudomonas mediterranea
Pathway
pmed00740  Riboflavin metabolism
pmed01100  Metabolic pathways
pmed01110  Biosynthesis of secondary metabolites
pmed01240  Biosynthesis of cofactors
pmed02024  Quorum sensing
Module
pmed_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pmed00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    E3Z27_25120 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E3Z27_25120 (ribD)
Enzymes [BR:pmed01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     E3Z27_25120 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     E3Z27_25120 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QHA84701
UniProt: A0A6I6QDA7
LinkDB
Position
complement(5758993..5760126)
AA seq 377 aa
MTVLAQQAVLDAHYMARALELARRGHYTTHPNPRVGCVIVRDGQIVGEGWHIRAGEPHAE
VHALRAAGELARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGL
QRLAQAGIATDSGVLEGEARLLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWIT
GPAARSAVQRLRAQASVVLTGADTVLADNARLTVRADELGLDAEQTALVMSRPPLRVLVD
GRLRVPLDAPFFKAGPALVATCMAVEEQYANGPECMIVAGDDGQVDLRRLLMELAARGVN
EVLVEAGPHLAGAFSRQGLVDEFQIFIAGKFLGSSARPLLDWPLAHMKDAPELKITEIRA
VGDDWRVIAVPIPPASV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgactgtcttggcgcagcaggctgtcctcgacgcccattacatggcccgcgcgctggag
ctggcgcggcgcggtcactacaccacccatcccaatccccgggtgggctgcgtcatcgtg
cgtgacggacagattgtcggcgaaggctggcacatccgcgccggcgaaccccatgccgag
gtgcatgccttgcgcgccgccggtgagctggcccggggcgccacggcctacgtgaccctc
gagccctgcagccaccacggccgtacgccgccttgtgccgatgcgttggtcaacgccggt
gtcgcccgggtcgtggcggcaatgcaggacccgaacccggaagttgccggtcgcggtttg
cagcgcctggcccaggctggtatcgccactgacagcggtgtgctggaaggcgaggcccgt
ttgctcaatcagggtttcctcaagcgcatggagcacggcctgccgttcgtgcgggtcaag
ctggccatgagcctcgatggccgcaccgccatggaaagcggcgaaagccagtggatcacc
ggcccggcggcacgttcggcggtgcaacggctgcgggctcaggccagcgtggtgctgacc
ggcgccgacacggtactggcggacaatgcccggctgaccgtgcgcgccgatgaactcggg
ctggatgccgagcagacggcattggtcatgagtcgcccgccgctgcgggtgctggtggac
ggtcgcctgcgggtgccgctcgatgcgcccttcttcaaggccggcccggcgctggtcgcc
acgtgcatggcggtggaagaacaatacgccaacggccccgaatgcatgatcgtggcaggc
gatgatggccaggtcgatctgcgtcgcctgctgatggagctggcggcccgtggcgtcaac
gaggtactggtggaggccgggccgcacctggcaggggcattctcccggcaaggtttggtg
gacgaattccagattttcatcgccggcaagttcctgggatcttcggcgcgaccgttgctg
gactggccgctggcgcacatgaaggacgcccccgagctgaaaatcaccgaaatccgtgcc
gtgggcgatgactggcgagtcatcgccgtccccatcccgccggccagcgtataa

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