Paraburkholderia megapolitana: FNZ07_27935
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Entry
FNZ07_27935 CDS
T06515
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg00540
Lipopolysaccharide biosynthesis
pmeg01100
Metabolic pathways
pmeg01250
Biosynthesis of nucleotide sugars
Module
pmeg_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FNZ07_27935 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pmeg01005
]
FNZ07_27935 (rfaD)
Enzymes [BR:
pmeg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FNZ07_27935 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pmeg01005
]
Core region
FNZ07_27935 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QDQ84880
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All DBs
Position
2:complement(3282082..3283074)
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AA seq
330 aa
AA seq
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MTLIVTGAAGFIGSNIVKALNERGEQRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVER
FARGDFGKVRAVFHEGACSDTMETDGRYMMDNNFRYSRAVLDACLAQGTQFLYASSAATY
GGSDRFVEDRTAEAPLNVYGYSKFLFDQVIRRVLPQAKSQIAGFRYFNVYGPRETHKGRM
ASVAFHNFNQFRAEGKVKLFGEYNGYGAGEQTRDFVSVEDVTKVNLFFFDHPDKSGIFNL
GTGRAQPFNDIATTVVNTLRALKDEPALSLAEQVQRGLIEYIPFPDALRGKYQCFTQADP
TKLRAAGYDAPFLTVQEGVDRYVRWLFGQL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatcgtcaccggcgcagccggctttatcggcagcaatatcgtcaaggcgctc
aacgagcgcggcgagcagcgcatcatcgcagtggacaacctgacgcgcgccgacaagttc
aagaacctcgtcgattgcgagatcgacgattatctcgacaagactgaattcgtcgagcgg
tttgcgcgcggcgacttcggcaaggtgcgtgcggtgttccatgaaggcgcctgttcggac
acgatggaaaccgacggccgctacatgatggacaacaacttccgttacagccgtgcggta
ctcgatgcgtgtctcgcgcagggcacgcagtttctgtatgcgtcgtcggcggcgacttat
ggtggctcggaccgcttcgtcgaagatcgcactgcggaagcgccgctgaacgtatacggt
tattcgaagtttttgttcgatcaggtgattcgccgtgtgttgccgcaggcgaagagccag
attgccggcttccgctatttcaacgtgtacggtccgcgcgaaacgcacaagggccgcatg
gcgtcggtggcgtttcacaacttcaaccagttccgcgccgaaggcaaggtcaagctgttc
ggcgaatacaacggttacggcgcgggcgaacagacgcgcgactttgtctccgtcgaagac
gtgacgaaggtgaacctgttcttcttcgatcatccggacaagtcgggcattttcaacctc
ggtactggacgcgcgcagccgttcaacgacatcgccacgacggtcgtcaacacgctgcgc
gcgctaaaagacgaaccggcgctgtcgctcgccgagcaggttcagcgcggactgatcgaa
tacataccgtttcccgatgcgctgcgcggcaagtatcagtgcttcacgcaagccgatccg
accaagctgcgcgcagccggctacgatgcgccgttcctgacggtgcaggaaggtgtcgat
cgctacgtgcgttggctgttcggccagctataa
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