Poecilia mexicana (shortfin molly): 106905531
Help
Entry
106905531 CDS
T08022
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106905531 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106905531 (clp1)
Enzymes [BR:
pmei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
106905531 (clp1)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106905531 (clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
MMR_HSR1
AAA_22
TniB
nSTAND3
CbiA
AAA_16
Motif
Other DBs
NCBI-GeneID:
106905531
NCBI-ProteinID:
XP_014825909
Ensembl:
ENSPMEG00000021088
UniProt:
A0A3B3XSZ1
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MAAEGVEKTSEDASSSGKVSKRFDLEKETELRFEVEAGEAADQVEMELLTGMAEVFGSEL
NRNKKYTFGPGSKIAVFTWQGCSVNLYGKPEVAYVSKDTPMLLYLNTHAALEQMRKQAER
ENERGPRVMVVGPTDVGKSTVCRMLLSYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIE
RPADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNRKASVGGCIIN
TCGWVKGSGYQALVHCASTFQVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERS
KECRRETRDEKIREYFYGFRGLSFFPFSFEVRFSDVRIYKIGAPSIPDSCLPLGMSQDDT
QLKLVPVTPGRDLTYHVLSVSSVDDGDEDARKSIVESPVCGFIVVTNVDTQAQVMKVLSP
APRPLPRHTLLIMDIRFMDMK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagggtgtggaaaagaccagcgaagatgcatcgtcttcggggaaggtgtcc
aaaaggttcgacctggagaaggagaccgagcttcgcttcgaggtggaggccggagaggcc
gcggatcaggtggagatggagctcctgacggggatggctgaggtgtttggctctgagctg
aaccgcaacaagaagtacaccttcggaccaggctccaagatcgcagttttcacttggcag
ggctgcagtgtgaatctgtatggaaagccagaggtggcctatgtgtccaaggatactcct
atgctgctctatctgaacacccatgctgccctggaacagatgaggaaacaagctgagcgg
gaaaatgagagggggcccagggtgatggtagtgggacccacagacgtggggaagtccaca
gtgtgccgaatgcttctcagctatgctgtgagagttggaaggagacctacgctggtggaa
ctggatgttggacagagtggggtttctgttccagggacagtatcagctctgtgcatcgag
cgtcctgcggacgtggaggagggcttctctgtccaggctcctttagtttatcactttggt
tctacgactcctggaaccaacatcaaactttacaacaagctgacatcgtgcctggccgag
gtgttctctcaacgctgtgaggtaaacaggaaggccagcgttggcggctgcatcatcaac
acctgtggctgggtgaagggttctgggtaccaggccctggtccactgtgcctccaccttc
caggtagacgtggtgcttgtgctggaccatgagaggctctacaatgaactcaaaagggac
ctgccgcactttgtgcgcgttgtgctgctgccgaagtccggaggagtggtggagcgctcc
aaggagtgccggcgggagactcgggatgaaaagatccgcgagtacttctacggcttccgc
gggctgtccttcttccctttctcttttgaagtgcgattctcggatgttcgcatctacaag
atcggggcgccgtccatcccggactcctgcctgccactgggaatgtctcaggacgacacg
cagctgaaactggtgccggtgactccagggagagacctgacgtatcacgtgctgagtgtg
agcagcgtcgacgacggagacgaagacgccaggaagagcatcgtggagagccccgtctgc
ggattcattgtggtcacaaacgttgacactcaggcacaggtgatgaaagtgctgtcacct
gcacccagaccactgcccagacacacgctgctcatcatggacatccgctttatggacatg
aaatga
DBGET
integrated database retrieval system
