Poecilia mexicana (shortfin molly): 106906569
Help
Entry
106906569 CDS
T08022
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106906569 (hnf1a)
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106906569 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
APP1_cat
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106906569
NCBI-ProteinID:
XP_014827382
Ensembl:
ENSPMEG00000012814
UniProt:
A0A3B3X773
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MEGEERARAAMARPSRLTALQEQLIWALLESGLSRDVLVQAVGELERSRAGAGAERGDKG
DGESSEEGEMDFPPPIFRELEKLPPEKASKLRAEVDRLLQEDPWQVAKMVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKQCEISQQFTNAKHGLAPVEE
QGEDTKKGRRNRFKWGPASLQILFNAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTSFNSQSASSSNAALPTSPEHGVKYSQ
QISCDTGSTARSSIGDRVGRLVVSPVQLEPSHTLLESHNPKLVSGSGPLPPVSTLTSLHS
LSASPASSQSLIMASVPSVMSLGESSLLIGLAPTQSQTVPVINNMGAGFTTLQPISFQQQ
LHTPHQQAIQQQLQGHMAASPFMATMTQLPCHMYNKSESPQYHSSSLLSQAMVITDSSSL
GTLTSLAAVRQILTADPEEETDSPLQEDSLHLQPHTPVPASSESLELYPSSQTTERHQSH
LLSPSPTDIGSYMPTQMVSTAQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggagagggcgagggcagccatggcgaggccgagtcgtctgaccgccctt
caggagcaactcatctgggccttgctggaatccgggctgtcccgggacgtcctagtccaa
gccgtgggcgagctggagcgcagcagggccggagccggcgccgagaggggagacaagggg
gatggagagagctctgaggaaggagaaatggatttccctccgcctatattccgagagctg
gagaagcttcctccggaaaaggcgtccaagctgagggccgaggtcgaccggttgctgcag
gaggacccctggcaggttgcaaaaatggtgaaaagctacatgcagcagcacaacctacct
cagagagaggtggtagagtccacaggcctcaaccagtcccatctctcccagcacctcaac
aaaggcacacccatgaagaaccaaaagagagctgctctctacagctggtacgtcaagaag
cagtgcgagatcagccagcaatttacaaacgccaaacatggcctggcaccggtggaggaa
caaggagaagacaccaagaaaggaaggaggaacaggttcaagtggggcccggcatcccta
cagatcctcttcaatgcctatgaacgtcagaagaaccccagcaaggaggaaagagaggga
ttggtagaggaatgcaacagagccgagtgcctccagagaggggtgtccccttcccagctt
gctggtctgggttcaaacctagttactgaagtcagggtgtacaactggtttgccaaccgg
cgtaaagaggaggcttttcgtcacaagttggcccttgacacatctttcaacagccagtca
gcttcctcctctaatgctgcccttccaacaagtcctgagcatggtgtaaagtatagccag
caaatctcctgtgacacagggagcacagcaagaagcagcataggggaccgtgtgggacgt
cttgtggtcagccctgtgcaactagaacccagccatacactcctcgagtctcataacccc
aagctggtgtctggcagtggaccactgcccccagtaagcactctgacatccctgcacagt
ctttctgcatctccagcctcttcacagagcctcatcatggcctcggtgcccagcgtcatg
agtctgggcgagtcctcgcttctaataggtttggcccctacgcagtcgcagactgtccct
gtcattaacaacatgggggctggtttcaccactctccagccaatttctttccagcagcag
cttcacacaccccaccagcaggcaatacaacagcagcttcagggtcacatggctgccagt
ccgttcatggcaaccatgacacagctgccatgtcacatgtacaacaagtcagagtcgcct
cagtaccattcatccagcctgctgtctcaagccatggtcatcactgacagcagcagtctg
gggaccctgaccagcctcgctgcggtccgacagatcctcacagcagatcctgaggaagag
acggattcccctttgcaggaagattctttacacctgcagccacacacacctgtaccagct
tcttccgagagcctcgagttgtatccttcctcccagacgacagaacgccatcagtctcac
ctcctctcaccttcacccacagacatcggctcctatatgcctacacaaatggtgtccaca
gcccagtaa
DBGET
integrated database retrieval system
