Poecilia mexicana (shortfin molly): 106907716
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Entry
106907716 CDS
T08022
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03020
RNA polymerase
pmei04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106907716
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
106907716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106907716
Enzymes [BR:
pmei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106907716
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
106907716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
106907716
NCBI-ProteinID:
XP_014829031
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRKQAHIQVVSKNLYSQDNKRTPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAVIGILQMICKTCSSIMLTKE
DKQQFMDYLKRPNLAYLQKRGLKKKISDKCRKRTICLNCGAFNGSVKKCGLLKIIHEKYK
TTKKVVEPFVSDFLQSFDIAIEHNKLMEPLLPRAQENLNPLVVLNLFRRIPAEDIPLLLM
NPEAGKPADLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLELMRKLVRNGPDVHPGANF
IQTRHTQIKRFLKYGNREKIAQELRIGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKIRISLPRPAIIKPIALWTGKQI
FSVILKPSKDCPVNANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGTGLLKAKQDLLDDG
YRKCDEYIEALQSGKLQQQPGCSAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGKPA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacaattcagagagacagatgtggcgaagaaaataagccacatctgcttt
gggatgaaatctgcagaacagatgcgaaagcaggcccacatccaggtggtcagtaaaaat
ctgtacagccaagataacaaacgcactcctttgccttatggagtgttggaccaccgaatg
ggaaccagtgagaaagacagaccatgtctgacatgtgggaaaaatctggccgattgttta
ggacattacggctacctggatttggagctgccctgctttcatgtcggctacttcaaagca
gttattgggattttgcagatgatctgcaagacatgttcgagtataatgctgaccaaagag
gacaagcagcagttcatggattacttgaaacggccaaacttggcctacctgcagaaacga
gggctgaagaagaagatctctgataaatgccgcaaaaggacaatttgcttgaactgtggc
gctttcaatggatctgtgaaaaagtgtggcttgcttaagatcatccacgagaagtataaa
acaaccaaaaaggtggtggagcccttcgtgtctgattttctgcagtcctttgatattgcc
attgagcacaacaaactaatggagcctttattgcccagagcacaggaaaatttgaaccct
ctggttgttctcaatctatttcggagaattcctgcagaagacatccctttgctgttgatg
aacccagaggcggggaaacccgcagatctcattatcacccgtctgcttgtgccgcctctc
tgcatccgaccgtcagtggtcagcgatctgaagtcgggcaccaatgaggacgatctgacc
atgaagctgacggagataatcttcctaaatgatgtcatcaaaaagcatcgaatgactgga
gcaaaaacccagatgataatggaggattgggacttcctgcagctgcagtgtgccctttac
atcaacagtgaactttctggcattcccctcaacatggcacctaaaaagtggaccagaggc
tttgtgcaaagactaaagggcaaacaaggtcgattcagaggaaacctctcaggaaaaaga
gtggacttctctggaagaactgtcatttcccctgacccaaacctaaggattgatgaggtt
gctgtccctgttcacgtggctaaaatcctgacatatccagagaaggtaaacaaagccaat
ctggaactaatgaggaaactcgttcgcaacggcccagacgttcaccccggagccaacttt
atccagactcgtcacacccagataaaaagatttttgaaatatgggaaccgtgaaaagata
gctcaggagctgaggattggtgacgtggtggaaagacatctaatcgatggagacatcgtc
ctcttcaatcgacagccttctctgcacaaactcagtatcatggctcacatagctaaagtc
aaaccacacaggacgtttcggtttaacgagtgcgtgtgcacgccgtacaatgccgacttt
gatggcgatgaaatgaatctccacctgcctcagactgaagaagccaaagccgaagccctg
gtcctgatggggactaaagctaaccttgttacaccaagaaatggcgagcctctgattgct
gctattcaggacttcctgacaggtgcgtacctgttgacgctgaaggacacctttttcgat
aggtcgaaagcctgccagatcgttgcatcgatacttgtggggaaagatgaaaaaatcagg
atctctctccctcgccctgctataataaagccaattgccttgtggacaggtaaacagatc
ttcagtgtcattttgaagccaagtaaagattgtcctgtcaatgcaaacttgcggaccaaa
ggcaaacagtactgcggcaaaggagaggatctctgccacaacgactcatttgtggtgatt
cacaacagtgagctgatgtgtggaagcatggataagggcaccctggggtccggctcaaag
aacaacattttctacatcttgctaagagactggggacagctggaggctgccaacgccatg
tcccgcctggcgcgactcgctccggtctatctctccaacagaggcttctctataggaatc
ggtgacgtgactcccgggacgggtttgttgaaggccaaacaggacctgctggacgacggc
tacaggaagtgtgatgaatacatcgaagctctgcagtcgggcaagctgcagcagcagccc
gggtgctcggcagaggagaccctggaggctctcatcttgagagagctttctgtgatcaga
gaccgagctggaagtgcctgtctgagggagcttgataagagtaacagccccctcattatg
gctctctgtggttccaaaggtaagcctgcctga
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