Poecilia mexicana (shortfin molly): 106917807
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Entry
106917807 CDS
T08022
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106917807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106917807
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106917807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
106917807
NCBI-ProteinID:
XP_014842534
LinkDB
All DBs
Position
Unknown
AA seq
2482 aa
AA seq
DB search
MAVVLLQALERTELNKLPKGVQNKLEKFVADLQNANEALKTQHERFKADSEQRYFDFEKQ
LTESQEQILSATNDLQILKEENKKLNEELSSLKGTEDETSEEKRPQQQTKAKYEIEAEKR
ELERLLEKRTQEVENLTEDMKRLNEKLTDTNKLKMELQLKLDEIQSSTASVQHREKRMEQ
EKELLEKKVDWLTAELSTKTEELLDTNREKGKEILELQGSLQSSNEQVSRLESQLTSLKE
LGESQSKRAEDLNNKLKQAKDEQVVMEDKYRVELNAHVKLSSLYKGAATDMEAKNQELSR
AVEELSKLVKETGEANKGLEKKVSDAEEQKVRVEAELREKIKKMEKELENATTKAAGKNC
CGSSLTEEQLDSMCPSAAAIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVSKVLDE
IVQEVESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKDEAKQSYDAMERE
KLKAERQLEDSSAQLCNLLVELEEARGNQVSKDDGSSSDISSTSEVNSSSQLSFRSVMEL
QRQNQSLLGRLRELEEEKSRERSREENARTTELESVVDKLQKEVEQLREQRNQQKQLADS
NARQRDMFKALLSQSTGFSLPPQGQELVLRPSAPATRSTPQRAAAAESSQTAHTKAALKQ
LNDSFTLYKKEKAENDRMLNETNDRLQKQLGELRSSHAKLTSQLDFSNKRYEILQETVSA
YRREISALQKSNQTMAATAQRHEHNIHTMVLDLRKASEKLALEQVRVENLTKERDMLRQA
ECRISKEKEAVLAEQRNQNLLLTNLKTIQLAMERTETETRQRLNNKIEQLEAELASIKAK
LEEEVAQRHALGRTMDAQLLEAKKQLETQNILLQKTKELLHGSEQQVTALKAQLASASSS
EAATASSIATTPIIRSAALRAPLRVHSPVPAASPQPSQSEQELSDLKAQLRSAEEQNAEL
AEQLKNANATVEQYRSVVLTLEDSLKKEKESRSPLEVRLKQSEDVQKQLEKKMLEVEKLK
QQELEERKKAVDAVEKQVLELQRHLKASQTEQQDALERAAAAVTQEQKATQNSLLQTKLA
GEAQAKYERELMLHAADVEALQQLKKTSQQEAARKREIEEELKKATSLLQVKTNVWSTVE
KRLKEELSSMKSRFEELGKQNTLLLQEMDEMAARSRQQQQQQQQQQQLDLSFSEEGKTTE
QILEILRFVRREKEIAVAQCEASEGEALRYKQQVEHKDRELKELQEALNAERERMQLTSK
TLCEQQEQLKKMESISALQETNRMLKLDRDKLELELQQAQAKVTKLQSDIAPLHNSLSIL
SEKNGSLQADKRLLEDDLKRWKAKVQHLVSQQKEGDAEEKQKITAEKEAQQKRVAQLIEE
AAKLRTELARSNASSNSAQAQLQGLKDSVVRLTSEKDSLKKDLETKNNEILEKNRTITQV
KKIGRRYKTQYEELKAQNDKTAGETSGKDDLKKTQDEIQTLKEEAQKRQAEAQKSQQDLE
AAQKEHQQSKEKLQELQTQLTQSQNELTQAQSQLTQAQNQLQQNQSQLALKQKVFDQLKN
QLQQTQIKLKSVQSLAQARQNQMQQMQEELQQAKEAVQQNAAKEKELQQNHGQEVSNLKT
SLSRAENKVAELQIRLDNLQKTISEREAEIMKLQEQLIEAKHAHEANQSALATQISQSTQ
STQASDSTAAGDFSQTMHDELTKLKQELSESKNREDQLKLQMAEKEEKTKKAILGAKLKI
NQVNSAKEQLSQENEELKQSKEELEVRMNALKSQYEGRLLRMDRELRELRETQAHSDGRE
ETQDQGGAKQSDQPRSSDQRQISLKSPAQDRGSLSTSEPPTANIRPTPSTQSPSNKPSPS
TGSKSTPRASIRPMVTPAPVPIPTPTATVMPTTQTDSQEALISTGASVHSTSSSLINPLA
SLTQPTSTQATAFVQPTQQQAANQDAGSGIEAECPSTSSSSSSCMPSTAKPGSKRSRETE
EEEEESRPESSQTPPNTKKLRLKPTIALQMEGDEELEGELGDMGEQQVSPDDSRELPEEA
FQAFSEEDEGVSQSVPSDQGSQGLPLIRDVIVIDTDSESRESKDGDQRVEEEDEDEEEDE
EEAGVDQEDDDDDEEDDDGAADSGMRGGEEHNEESQEAEDEREEAAPSDGSNAEENASGA
PSSSQRPADPSQSGEGTSWGADLGSARDYLHHPPACSSAHSPCSSSLMPRLSQPRRPSPR
LFIQAPAPELGPPHTQRQPSQLRRPSSGRGPQLTPGLASMPFFDDDDRMVPSTPTLVVPH
RTDGFAEAIHSPQVAGLSTRFRFGPPEDLLQQASASHSDLGQLASQGGLGMYESPLFLAA
HDEDGGGRSVPTTPLQVAAPVTVFTENMPSDSGDNLASQSVPMVTASTGMAAAADDGDEV
FMEQEGDGPDIDVSLDGQMVMESTGQQHDDASLPSTSQDPDTSSDSQPRSVTSQRQTGIL
SGRGRFLSRTGGLSRAGRGGAT
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgtcttactgcaggccctagagcggacggagttgaacaaactcccgaaaggc
gtccagaacaagctggagaagtttgtagcagacctgcagaatgctaacgaggcgctaaag
acgcagcatgagcggttcaaagcagacagtgagcaacgatactttgactttgagaaacag
ctgacagagagccaagaacagatcctttctgccacaaacgacctgcagatcctgaaagag
gagaataaaaaactaaatgaagagctgagctctctgaaaggaacagaggatgagaccagt
gaagaaaaacgaccacaacagcaaaccaaggcaaagtatgaaattgaggcggagaagaga
gaactggagaggctgctggagaagagaacgcaggaggtggagaacctgacagaggacatg
aaacgtctgaatgagaagctgaccgacaccaacaaactaaagatggagctccagctaaag
ctggatgaaatacagtcatctacagcctctgtgcagcaccgagagaaacgaatggagcag
gagaaagagctgctggagaagaaagttgattggttaactgcagagctgtcgaccaaaact
gaggagttactggacaccaacagagagaaggggaaggagatactggagctgcagggcagt
ctgcagagcagcaacgagcaggtgagcagacttgaaagtcagctcacttctctgaaagaa
cttggcgaaagccaaagtaaaagagctgaagatctcaataacaaactgaaacaggcaaag
gatgaacaggttgttatggaggataaataccgcgttgagctcaacgctcatgtaaagttg
tcatcactctataagggagcagcgactgacatggaggcaaagaaccaggagctgagcaga
gcagtggaggagctcagcaagctggtcaaagagacgggagaagctaacaagggtctggag
aagaaagtttcagacgctgaagagcaaaaagtccgagtcgaggcagaactcagagagaag
ataaagaaaatggagaaggagctggaaaatgcaacgacgaaggctgccggaaaaaactgc
tgcgggtcgtctttgacagaggagcagctggactccatgtgtccatcagccgctgccatc
gctgcaattgtcaagcctggcatgaaattttttgatctatataacgcatacgcagagtgt
cagacccagcttcagcttgagaagcaggagacgaggagggtgagcaaagtcttggatgaa
atagtccaggaggtggagtccaaagctcctgtgctcaagcgacagagagaggagtacgag
agcatgcagaggtcaatggcttccctatgcaacaaactggaacaagctcgaacggagatc
tacagcctgcaaaaagagaaagatgaagccaagcagagctacgacgccatggagagagag
aaactaaaggctgagaggcaactggaggattcgtctgcacagctgtgcaatctcctggtc
gagttggaagaagcgcgcggcaatcaggtgtccaaagacgacggcagctcctccgacatt
tccagcacctcggaggtgaacagctcgagccagctgtcgtttcgcagcgtgatggagctg
cagagacagaaccaaagcctgctgggaagactacgggagctggaggaggagaagagcagg
gagcggtccagggaggaaaacgcacgcacaacggagctggagtctgttgtggataaacta
cagaaggaggtggagcagctgagagagcagaggaaccagcagaaacagctggccgactcc
aacgctcggcagagggacatgttcaaggctctgctgtctcagagcactggcttcagctta
cctcctcaaggtcaggagttggtcctccgtccttccgccccggctactcgctccactcct
cagagagccgcagccgcagagtccagccagaccgctcacacaaaagctgctctaaaacag
ctcaacgactctttcaccttgtataagaaggagaaggctgagaatgaccggatgctgaac
gaaactaacgaccgactgcagaagcagctgggggagctccgctccagccacgccaaactc
acttcgcagctggactttagtaacaagaggtatgagattcttcaggaaaccgtgtcagct
taccgcagagagatcagcgcgctacagaagagtaaccaaacaatggccgccacagctcag
cggcacgagcacaacatccatacgatggtcctggacctgaggaaggccagtgaaaaactg
gcactggaacaggtgcgtgtggagaacctgactaaagagagagacatgttgcggcaggca
gagtgtcggatcagtaaagagaaggaagctgtcctggctgagcaacgcaaccagaacctt
ctgctgaccaacctgaagaccatacagttggccatggagcgtacagagacagagacacgc
cagcgacttaacaacaaaatcgaacagctggaggctgaactggcctcaataaaggccaag
ctggaggaggaagttgctcagagacacgccctcggacgaaccatggatgcccagttattg
gaagcaaagaagcagctggagacacaaaacatcttgctgcagaagaccaaggagctgctg
catggctctgagcagcaggtgaccgcgctgaaagctcagctggcgtctgcgtcttcctcc
gaagccgccaccgcctccagcatcgcaaccaccccgattatccgatctgccgccctgcgg
gctccactcagagtgcactccccagtccctgcagcctctccgcagcccagccaatcagag
caggagctttcggacctgaaggctcaactacgaagtgccgaggaacagaacgctgagctg
gcggagcagctgaagaacgctaacgccacggtggaacagtaccgatctgtagttctaact
ctggaagacagcttgaagaaagaaaaggagtcgcgctctcctctggaggtccgactgaag
cagtcagaggatgtgcagaagcagctggagaagaagatgctagaggtggagaagctgaag
cagcaggagctggaggagaggaagaaggctgtggatgcggtggagaaacaggtgttggag
ctgcagcgccatctgaaggccagtcagacagaacagcaggacgccctggagagagccgcc
gccgctgtcacacaggaacagaaagccacacagaacagcctgctgcagactaagctagct
ggcgaggcgcaggccaagtacgaacgagagctgatgcttcatgctgccgatgtggaggct
ctgcagcagctgaagaaaacatcccagcaggaagcggcacgcaagagggagatcgaagaa
gaactgaagaaagctacctccctcctacaagtcaaaactaatgtctggagtacagtggag
aagcgactaaaggaagagctgtccagtatgaaatctcgctttgaggaactgggaaaacaa
aatactctcctgctccaggagatggatgaaatggctgccaggagtcgccagcagcagcag
cagcagcagcagcagcagcagctggacctttcgtttagtgaggaagggaaaaccactgaa
cagattctggaaatccttaggtttgtgcgtcgtgagaaggagattgccgtcgctcagtgc
gaggcgtctgaaggagaggctcttcgctacaaacagcaagtcgagcacaaagacagagaa
ctgaaggagctgcaggaagctctaaatgccgagagggagaggatgcaattgaccagcaag
actctgtgtgagcagcaggaacagctgaagaagatggagagcatcagtgctctgcaagaa
accaacaggatgctgaaactggaccgagataagctggagctggagcttcagcaggctcag
gctaaagtaacaaagctacagtcagacatcgcccccctgcataactctctgtccatactg
tcggagaaaaatggctccctgcaggctgacaagaggctactggaggacgacctcaaacgc
tggaaggctaaagttcaacacctggtcagccaacaaaaagagggagacgctgaggagaaa
cagaagatcacagctgaaaaagaggcacagcagaaacgcgtagcgcagcttattgaagag
gcggctaagctgaggaccgagctggccagatccaacgccagcagtaattcagctcaggcc
cagcttcaagggctcaaagactccgtggtccgcttgacatcggaaaaagattctctgaag
aaagacctggaaaccaaaaacaatgaaattctggagaagaacaggaccatcactcaggtg
aagaagattggacgccgctacaagactcagtacgaggagctgaaagcccagaatgataag
acggccggggaaacttctggaaaggacgacctgaagaagacccaggatgagatacaaact
ctgaaggaggaagctcagaaaaggcaggcggaggctcagaagtctcagcaggacttggaa
gcggctcagaaggaacatcagcagagcaaagaaaaactccaggagctccaaacgcagctc
acgcagagccagaacgagctgacacaggcccagtcccagctgactcaggcccagaaccag
ttgcagcagaatcagagccagctggccctgaagcagaaagtatttgaccaattaaaaaac
caacttcagcagacacagattaagctgaaatcagtccagtctctggcccaggcccggcag
aaccagatgcagcagatgcaggaggagcttcagcaggctaaagaggccgtccagcagaac
gctgctaaagagaaggagctccagcagaaccacggtcaggaggtcagcaacctgaagacc
tctctgagtcgagccgaaaacaaggtggctgagcttcaaatccgactggacaacctgcag
aagaccatttctgagcgtgaagcagagattatgaaactgcaggagcagctaattgaagct
aagcatgctcatgaagctaaccaatcagcacttgccacccagatttcccagtctacccag
tctacccaggccagtgactccacagctgctggagatttcagtcagacaatgcacgatgag
ctgaccaaactcaaacaggagctttctgagagtaagaacagagaagatcagctcaaactg
cagatggctgagaaagaggagaagaccaaaaaggccattctgggagccaaattaaaaatc
aaccaagtaaacagcgccaaagagcagctcagccaggagaacgaggagctgaagcagagc
aaagaggagctggaggtcaggatgaacgccctcaagtctcagtacgaaggacgacttctt
cgaatggacagagagctgagagaactgagagaaacacaagcgcactctgatgggcgggag
gaaactcaggatcagggcggagccaagcagtcggatcagcccagatcttcagaccagaga
caaatttctttgaagagtcctgctcaagacaggggaagcctgagcacctctgagccgccc
accgccaacattcggcccactccaagcactcagtcacccagcaacaagccgagtccgtcc
accggcagcaagtccacccctcgcgccagcatcaggcccatggtcacacctgcacctgtc
cccatcccgacacccaccgccacagtgatgcccactacacagacggacagtcaggaggct
ctcatctctacaggagcttctgttcactccaccagctcttccctcataaatcctctggcc
tctttaactcagccaaccagcactcaggccacggccttcgttcagcccacccagcagcag
gcggccaatcaggacgcaggatccggcatagaggcagaatgtccgtccacatcctcctca
tcctcatcctgcatgccgtcaacagctaaacctggctcaaagcgaagcagagaaaccgaa
gaggaggaagaggaaagtcgaccggagagttcccaaacgcctcccaacactaaaaaacta
cgactgaaaccaacaatcgctctgcagatggagggtgatgaggagctggaaggagagctg
ggggacatgggagagcagcaggtttcacctgatgacagtcgggagctgccagaggaagcc
ttccaggcgttttctgaggaggacgaaggagtttcccagtccgtcccgtctgaccagggc
tcccagggcttgcctttaattcgagacgtcatcgtgatcgacaccgacagcgagagcagg
gagagcaaagacggggaccagagagtggaagaagaggatgaagacgaagaagaggatgaa
gaggaagcaggagtagatcaggaagacgacgacgacgacgaagaagatgatgatggagct
gctgacagcgggatgagaggaggagaggagcacaacgaggagagtcaggaggctgaagat
gagagagaggaagccgctccttcagacggttccaacgctgaggagaatgcgagtggcgcc
ccctccagctcgcagcgccctgctgacccctcacagagcggagaaggcaccagctgggga
gcagatctcggatctgctagggattacctccaccaccctccagcctgctcctctgcacac
tcgccctgctcctcctccctgatgccccgcctctcccagccgcgcaggccgtcaccccgg
ctcttcatccaggctccggcccctgaactgggacccccccacacacagagacagccttct
caacttcgtagaccatcatcgggtcgtggacctcaactaactcctggattagcctccatg
ccgttctttgatgacgatgacagaatggttcccagtactcccactctggtggtcccacac
cgcaccgatggctttgccgaggctatacattctccacaggtggcaggtctttccaccaga
ttcaggttcgggcctccagaagatttgctgcagcaggcatcagcttcacattcggacctg
ggacagctggcgtcgcaaggaggcttggggatgtatgagtctcctctcttcctggctgct
catgatgaagatggcggagggaggagtgtccctaccacacctttacaagtggctgcacca
gtgacggtctttacagagaacatgccctctgacagtggcgacaacctggcctcccagtcg
gttcccatggtaaccgcctcaactgggatggctgctgctgcagatgatggagatgaggtt
ttcatggagcaggaaggagacggtccagatattgacgtttctctggacggccagatggtc
atggagtcaacaggacagcagcacgatgatgcctccctgccgtctacaagtcaagatcct
gacaccagcagtgacagtcagcctcgctcagtaacaagccagcgtcagacgggcatcctc
tcaggcagaggacggttcctcagtcgcacaggaggactttctcgagcaggaagaggcgga
gccacatga
DBGET
integrated database retrieval system
