Poecilia mexicana (shortfin molly): 106918461
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Entry
106918461 CDS
T08022
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03030
DNA replication
pmei03410
Base excision repair
pmei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106918461 (pole)
03410 Base excision repair
106918461 (pole)
03420 Nucleotide excision repair
106918461 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmei03032
]
106918461 (pole)
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106918461 (pole)
Enzymes [BR:
pmei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106918461 (pole)
DNA replication proteins [BR:
pmei03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
106918461 (pole)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
106918461 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Sigma70_ner
CpXC
APP_N
Motif
Other DBs
NCBI-GeneID:
106918461
NCBI-ProteinID:
XP_014843761
LinkDB
All DBs
Position
Unknown
AA seq
2294 aa
AA seq
DB search
MVLQNSGRYKSDRGQSGANQENQDDGSSMSALKRLERSQFTDDMDARFGFDRMKEPGEKT
GWLINMHPTEILDEDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYL
SKKFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNRER
EQSNDAYTSMLSSALSGGSVISAEEDGTLKSIADQLDNIVDMREYDVPYHVRVSIDLKIH
VAHWYNVRYRGSAFPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYDGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLSMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQIFNKLTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAVEEEEKIPLEQVTNFNEV
CDEIKKKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHTLNREEQAKHE
KKRLADYCKKAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
STAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNDKKPKVTISYPGAMLNI
LVKEGFTNDQYHELVDPTSLTYNTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLDEVYASVAKVADYWLDVLYS
KAANMPDAELFDLISENRSMSKKLEEYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQIAHQP
LQAGQAADMEDFGAAPRPLQPAILISTKRKRASQGGDSQVESQDVELTQSWREILGPPPP
MGKTREERLVWLRYHKKKWELQLRQRKEKKKRRKLLDGEPQPVGGGVIRGGPSTGLGSFL
RRTARSILDMPWQIVQIAETNHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQDEGG
VAYRKVNRMLPRSNIVYYLYEYSVPEDMYQNHINEINADLSAPDIEGVYETQVPLLFRAL
VQLGCVCMVNKHIVRDLAGRETDSFDLDHLEMRSLAQFSYLEPGSVRHMYLYHHSQGQKA
LFGLFIPSQRKASVFILDTVRSNQMPNLSNVYTAERTALLEKTSEELLPPEKHTFEVRAE
NDIKAISRALQRILLNYKDERRGPTLIAVQSNWELQRLAAGMPVLEEFPVVPVHVVDEIN
YNVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLR
KHNHLLWLSPTARPDLGGKEADDSRLVMENDEKGSVEINSQGCYSTACVELDLQSLAVNT
ILQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSM
VVGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKR
LGSTVVYGNFNRIILCTKKRRIDDAIAYVEYITNSIHSREIFHSLSISFSRCWEFLLWMD
PSNYGGVKGKLPSSVLYGEEGAKQKKRKQGEEDEEGSEDEDEDDAEEDDGDAETDEVEEL
IESNWNVMHYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRAGSQASQ
QAVGDLSALPGMISFSQEYVASELTQNIFTITQKIQKKVTGTRSVTQSSEMFPVLPGSHL
PLNNPALEFVKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPE
VICHHCNFCRDLDLCKDPTVAQDGSVLPQWFCSNCQMQYETESIETALVDALQKKLMSYT
LQDLVCTKCKGVKEANMPLYCACAGNFDLTFSAKSFSEQTAVFRNIASHYNMRFLEETID
WLLEMSPQISQSRH
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcagaacagcggacgatacaaatcggacaggggccaaagtggagcaaaccaa
gaaaaccaggatgatggatcctccatgtcggctctcaagcggctggagcgcagccagttc
accgacgacatggacgcccgcttcggcttcgacaggatgaaggagcccggggagaaaacg
ggctggctgatcaacatgcaccctacggagatcctggatgaagacaaaaggatgatcagt
gccgtggactattattttatccaggaggacgggagcagattcaaggtggctcttcccttc
aagccttacttctacatagctactaaaaagaactgtgagagagaggtcatctcatatttg
tccaagaagttccaaggaaaagtggcgaaacttgaaattctcccaaaggaggacttggac
ctgccgaatcatctagttggactgaagagaagttacatcaagctgtcgttcaacaccgtg
gacgatctagttaaagtcaagcgtgagatttctccagccgtacgcaagaacagagagagg
gagcagtccaacgacgcctacacatcaatgttgtcaagtgctctgtcaggaggcagcgtg
atctcagccgaagaggacgggacgttgaagagtatcgccgatcagctggacaacatcgtg
gacatgagagagtacgatgtcccttatcacgtccgagtgtccatcgacctcaagatccat
gtggctcactggtacaacgtccgataccgaggcagcgccttcccgccagagattgtgcga
cgagacgatctggtggagcgcccggacccagttgttttggctttcgacatcgaaaccacc
aaacttcctctgaaattcccagacgcagagacggatcagattatgatgatctcctacatg
atcgacggacagggctttctaatcacgaatagagagatcgtctccgagaacatcgaggat
tttgagttcactcccaagccagaatatgacgggcctttcacggtttttaacgaggatgat
gaggctgctctcatccagaggtggttcgatcacgttcaagaaacaaagccgaacatcttt
gtcacctacaacggagacttttttgactggccttttgtcgagactcgcgcggcgctccat
ggactgagcatgcacagggaaatcggcttccagaaagacaaccagggagagtataaatcc
agccaggccatccacatggactgcctcaggtgggtaaaaagggacagctacttgcctgta
ggaagtcacaacctgaaggcagcagccaaggctaaactgggctacgacccggtggagctg
gacccagaggagatgtgccgaatggcaactgaggaaccacagacgttagcaacctactct
gtgtcagacgctgtggccacatattacctctacatgaaatatgttcaccccttcatcttc
gccctgtgcaccatcatccccatggagcctgatgaggtgctacgtaaaggttcaggcacc
ctgtgcgaagccttgctcatggtgcaggcgttccacgccaacatcgtcttccccaacaag
caggagcagatctttaacaagctgacggacgacggccacgtcctggactctgagacttac
gtgggcggccacgtggaggcgctggagtctggagttttccgcagcgacatcccctgtcgc
ttcaagatgaacccggctgcctttgactttctgcttcaaagagtcgagaggacgatgcgt
cacgccgtcgaagaggaagaaaagattcctctggagcaggttaccaactttaacgaggtt
tgtgatgaaatcaaaaagaagctaacttccttgaaggatgtcccaaacaggatcgaatgc
cccctcatctaccatctggacgtcggggccatgtaccccaatatcattctcacaaaccgt
ctgcagccatcagctatggttgatgaggccacatgtgctgcctgtgactttaacaaaccc
ggagccacctgccagaggaggatggcctggcagtggagaggagaaatcatgcctgcaagc
cgcagtgagtttcaccgcatccagcagcagctggagtcggagaagttcccacctctgttc
cccaacgggccccctcgggcgttccacactctgaaccgggaggagcaggccaaacacgag
aagaaacggctggcagactattgcaagaaggcctacaagaagactcatgtcacgcggctt
gaggagcgagttaccaccatctgtcagagagaaaactccttctacgtcgacacagtcaga
gctttcagggatcgccgttatgaattcaaaggacttcacaaagtttggaagaagaagctg
tcaacagctcaggacaatggagatgctgctgaggtgaagcgctgcaaaaacatggagatc
ctgtacgagtctctgcagctggcccacaaatgtatccttaactctttctacggctacgtc
atgagaaaaggggcgcgctggtactccatggagatggctggcatcgtgtgcttcaccgga
gctaacatcataactcaggccagagaacttatcgaacaaatagggaggcctctggagctg
gacactgacgggatctggtgtgtcctccccaacaccttccctgagaactttgtggtaaaa
accagcaatgataaaaagcccaaagtgaccatctcttacccgggggccatgctcaacatc
ctggtgaaggagggattcaccaacgatcagtaccacgagctggtcgaccccacgtcgcta
acctacaacacccggtcagagaacagcatcttcttcgaggtggacgggccgtatctggcg
atgattctgcccgcctccaaagaggaagggaagaagctgaagaagaggtatgccgtgttt
aacgaggacggctcgttggctgagctcaagggctttgaagtgaagaggagaggagagctt
cagctcattaagatttttcagtcctctgtgtttgaggcgttcctcaaaggcaccactctg
gacgaggtctacgcgtcggtggccaaggtggccgactactggctggacgtcctctacagc
aaggccgccaacatgccggatgcggagctgttcgacctgatctcggagaaccgctcgatg
tccaagaagctggaggaatacggcgagcagaagtccacgtccatcagcacggccaagagg
ctggccgagttcctgggagaccagatggtgaaggatgctggtctgagctgtcgctacgtc
atctcccggaaaccagagggttccccggtcacagaaagggccattcctctggccatcttc
caggctgagcccagcgtgaagaaacatttcctccggaagtggctgaagatgcccagcctg
catgacttggacatccgctctatcctcgattggagctattacatcgagaggttgggcagt
gcaatccaaaaaattatcaccatccccgctgcgctacagcaagtgaagaacccagttccc
agagtgaggcatcctgactggctccacaagaaactcctggagaaaaacgacatctacaag
cagaagaaaatcagcgaactgttcaccagtgagggcaagagacagattgcccatcagccc
ctgcaggctggccaagctgcagacatggaggactttggggcggcgcctcgacccctgcag
cccgccatcctcatcagcaccaagaggaagcgggcttctcaaggaggggacagccaggtg
gagtcccaggacgtggagctcacgcagtcctggagggaaatcctgggacctccacctcca
atgggaaaaacgcgggaggagcgactggtgtggctgcgctatcacaagaaaaagtgggag
ctgcagctgaggcaaaggaaggagaagaagaagaggaggaagctgctggacggagaacca
cagccggtcggaggaggagtcatcagaggtggccccagcaccgggctgggaagcttcctg
cggcggacggcgcgcagcatcctggacatgccgtggcagattgtgcagattgcagagacc
aaccaccctggtctgtataagctgtgggctgtgattggaaacgatcttcactgcatgaag
ctcaacatcccgcgcgtcttctacgtcaaccagaaagtcccaaaacaggacgaaggagga
gtcgcgtacaggaaggtgaaccgcatgctgcctcgctccaacattgtgtactacctgtat
gagtactcggtgccagaggatatgtatcagaaccacatcaatgagatcaacgctgacctc
tctgcaccggacattgaaggagtctacgaaacacaggtccccctgctgttccgtgcgctg
gtgcagctgggatgtgtgtgcatggtaaacaagcacattgtgagggatctggctggcagg
gagaccgactccttcgatctggaccatctggagatgagatctctggcccagttcagctac
ctggaacctggaagtgttcgccacatgtacctgtaccatcacagccaaggccagaaggct
ctgtttggcctcttcatcccctctcagcgcaaagccagcgtcttcatcctggacacggtc
agaagcaaccagatgcccaacctgagtaacgtctacaccgccgagcgcaccgccctcctg
gagaagacgtcggaggagcttctgcctccagaaaaacacaccttcgaggttcgagctgaa
aatgacatcaaggccatctcccgagctctgcagcgcatactgctgaactacaaggacgag
cgacggggacccaccctcattgctgtgcagtctaactgggagctgcagcggctggcagca
gggatgcctgtgctcgaggagttcccagtggttccagttcacgttgtggacgagatcaac
tacaatgtgctggactggcagcggcacggagcccgacgcatgatccgccattacctcaac
ctggacagctgcctgtcgcaggctttcgacatggccagatattaccaccttcctgtgggg
aacctgcctcaggatgtgtccatcttcggctcagacttgttcctggcgagacacctgcgg
aaacacaaccacctgctgtggctttctcccacagcgagaccagacctcggagggaaagag
gccgatgacagtcgtttggtcatggaaaacgatgagaagggctcagtggagataaactct
cagggatgttactccacagcgtgcgtggagctggacctgcagagccttgcggtgaacaca
atcctccagtcgcagcacgtcaacgacatggagggcggagccagtctgggcgtcagcttt
gatgtgatccagcaggcctcgctggaggacatgatgtcaggaaaccagggcgccagcgct
ctcgctagctacgacgagacggcgctctgctccaacaccttcaggatcttaaagagcatg
gtggtcgggtgggtgagggagatcacgcagtaccacaacgtgtacgcagacaaccaggtg
atgcacttctaccgctggctgcgctctccgagttctctgctctacgacccggcgctgcat
cgcaccctgcacaacatgatgaagaaggtgtttctccagctggttgcagagttcaaacgt
ctggggtcgactgtggtgtacgggaacttcaacaggatcatcttgtgcacaaagaaacga
aggatagacgacgctatcgcctatgtggaatatatcaccaacagcatacattcgagagaa
atcttccactctctgtccatctccttctcacgttgttgggagttcctgttgtggatggac
ccgtctaactacggcggtgtgaagggaaaactgccttccagcgtcttgtacggagaggaa
ggagccaaacagaagaaaagaaaacaaggagaggaagatgaagagggcagtgaagatgaa
gatgaggatgatgctgaggaagatgatggcgatgcagagaccgacgaggttgaagagctg
attgagagcaactggaatgtcatgcattatctcccccaaacagcctcctgtcagaaatac
ttcctcatgattgtgtccgcctacatagctgcagtttaccacagcatgaaagaggagctg
agacgtaatgctcctggagcaacgccagtcaagcggcgcgcaggcagccaggcttcccag
caggcagtcggggacttgagtgcgcttcctggaatgatctccttctcccaggagtatgtg
gccagcgagctgacgcagaacattttcaccatcacccagaagatccagaaaaaggtgacc
gggaccaggagtgtaacccagagctcagagatgtttcctgtcctgcccggctcccatctg
ccgctcaacaatccggcgctggagttcgtcaaatacgtctgtcaggtcctttcgcttgat
gccaacatcgtgaatcaggtgaacaaactgaagcgagacctcctgcgtctcgtggatgtc
ggagagttttcggaggaggcccagtttcgtgacccttgcaactcctacatactgccagaa
gtcatctgtcaccactgcaacttctgtcgggatctcgacctctgcaaggacccgactgtg
gcacaggatgggtcggtcttacctcaatggttctgctcaaattgccaaatgcaatatgaa
actgagtctattgagacggccctggtggatgctctgcagaagaaacttatgagctacact
ctgcaggatctggtctgcaccaaatgcaaaggggtgaaagaagccaacatgcccctttac
tgcgcgtgtgccggaaactttgacctcaccttctcagccaagagcttctccgagcagacg
gcagtgtttcgaaacatagcctcccactacaacatgagattcctggaggagaccatcgac
tggctgcttgagatgagccctcagatcagccagagcaggcactga
DBGET
integrated database retrieval system
