Poecilia mexicana (shortfin molly): 106922372
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Entry
106922372 CDS
T08022
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmei03016
]
106922372 (cdkal1)
Enzymes [BR:
pmei01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
106922372 (cdkal1)
Transfer RNA biogenesis [BR:
pmei03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
106922372 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
Glyco_hydro_120_ins
Motif
Other DBs
NCBI-GeneID:
106922372
NCBI-ProteinID:
XP_014850225
Ensembl:
ENSPMEG00000024423
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MCVLTLPKPSAEVKLQLGKITMPSACDSLIEDIEDMVSFNDPTPHDRQSARKSILPRTRK
KELLSNEELRVDSLIPGTQKIWMKTWGCSHNNSDGEYMAGQLAASGYKMTEDPAEADLWL
LNSCTVKNPAEDHFRNSIKKAQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVE
VVDEAVKGHSVRLLGQKKYGGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKH
ARGDLASYPIEELVERARQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVQEIPEG
AMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFRRV
VDFLKDKVPGVTIATDIICGFPGETEEDFQDTLKLVKHYQFPSLFINQFYPRPGTPAAKM
EQVPAHVKKQRTKKLSELFHSYNPYNHKVGERQFVLVTEESFDAQYYVSHNKFYEQVLVP
KRADFKGKMIEVDIYEAGKHFMKARPVEDSKPFTPSIAEPLQKGEVSGLLQEHMANGVKG
AACVPPDSALLVGSCSLDRELLKKLGICMALAAAVLAFIIEKLY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgctaacattaccaaaaccaagcgcggaagttaaactgcagcttggaaagatc
accatgccatccgcctgcgactctctgattgaagacattgaggatatggtgtcttttaat
gaccccactcctcatgacagacagtctgcaagaaagagtattctgccaaggacaagaaag
aaggagcttttgagcaacgaagagcttcgagtagacagtttgatccctggcacccaaaag
atctggatgaaaacgtggggatgcagtcataacaactcagatggggagtacatggctgga
cagctcgctgccagcggatacaagatgacggaggacccagcagaagcagacttgtggttg
ctgaacagctgcacagtgaaaaaccctgcagaggaccacttcagaaattcaatcaagaaa
gcccaggagcagcagaaaaaagtggtcgttgcaggttgtgttcctcaggctcagccccgg
atggactaccttaaaggtcttagcattattggggtccaacagattgatcgagtggtggaa
gtagtggacgaggctgttaaaggtcactctgttcgcctgctgggtcagaagaaatatggt
ggacggagacttggaggtgcgagattggacttgccgaagattagaaagaaccctctgatt
gaaataatctccattaacactgggtgtctgaatgcatgtacgtactgcaagacaaaacat
gctcgaggagacctggccagctatcccatagaggagcttgtggaacgagctaggcagtct
ttccaggagggagtgtgtgagatctggttgacaagtgaagacactggtgcttacggcaga
gacatagggacagacctgcctacattactgtggagattagtgcaggagatacctgaagga
gccatgctgaggctgggcatgaccaaccctccttacatcctggaacacctggaggagatg
gcaaagattttaaatcatccccgtgtttatgccttccttcatgttcccgtgcagtcggcc
tcagacagtgtcctgatggacatgaagagggaatattgcattgatgacttcagaagagtt
gtggacttcctcaaagacaaagtacctggagtaacaattgctacagatataatctgtgga
tttcccggtgagactgaagaagacttccaggacactttaaaacttgtgaaacactatcag
tttcctagtttgttcatcaaccagttttaccccagacccggtacacctgctgctaagatg
gagcaagttccagcacatgtgaaaaagcaaaggactaaaaaactttctgaactcttccat
tcttacaacccctacaaccacaaggtaggagagaggcaatttgtgctggtgacagaggag
tcttttgatgcccagtactacgtttcccacaacaagttctacgaacaggtgctggtaccg
aaaagggccgatttcaaaggaaagatgattgaagtagacatctacgaagcagggaagcac
tttatgaaggctcgaccagtagaagacagcaagcctttcactccctctattgcagagcct
cttcagaaaggagaagtgtctggtctgttgcaggaacatatggccaacggagtcaaagga
gctgcttgtgtgccacctgactctgcgctcctggtcggctcctgcagtctggacagagaa
ctgctgaagaaactggggatttgcatggcactagcagccgccgtcttggcctttattatt
gagaagctctattaa
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