Poecilia mexicana (shortfin molly): 106929963
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Entry
106929963 CDS
T08022
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106929963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106929963
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106929963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
106929963
NCBI-ProteinID:
XP_014862717
Ensembl:
ENSPMEG00000014841
LinkDB
All DBs
Position
Unknown
AA seq
1741 aa
AA seq
DB search
RVLLAQATGVAFPQQGTPPEEFSLTSTPRRSPTTTPTTGAPTALVTMAESVEVLEAKAAL
RQLQEVFSAYKKERLESDKAMNEQNEKLQEQLSDLRSQNAKTSTQLEFASKRYEMLQDNV
EGYRKEIASLREKEQKTAAATQKLEQSVHTLNEDLKAAKEKLTLTEGQAEKLRKERDMLK
LVESRLNQEKETFVSQQQNQNLLLTNLQTIQATLERSEADARQRLNGQIEKQELQISQLQ
KKLEQEVEQRHLCSRNQEIQLMDVKRQLETQVALHQKTKELLNGAELELNTLRMQQGRPE
ARHTLGSPPTPVFRGLQGSDQEREELQGRLQLAETRAEELAESLRAATSSMEQYRAMAQS
LEESLETEKQVTEQARLSVEASLKEAQERHRTLEEKLQEAEKEKQDLEESKRKDLASLEE
QINDLKRSLSDAQTDHQAVLQQLEVVEAHKQQALQDQQEQAKLAAEAQDKYEREMMLHAA
DVEALQAAKAQALQAAELRNQLEEKVQRVSAELLEARVSWEVQEKILKEETSKMESRYEE
LQRQNTLLHEQVQTMSTKMAANIQRAANESSLNVSLSEEGKSQDQLLEILSFVRREKEMA
ESRFEVAQGESLRHRLRVEHLERELREVQDSLTAARERMQVTAKTLAQHDELMKKTETMN
ILVETNKMLREEKTKMEQELQQTQAKVQKMESDVFPLQQSNSELSEKNGMLQAEKAILEE
DIKRWKARTQNLLSQQKDSDPDEYKRLNTEKELHLKRIQQLTEENSRLKAELNKLNNMTT
SLQGQMQNLREGMSKANDDRTVLRKDLETKNQEIQEKVRTITQVKKIGRRYKMQYDELKV
QHDKLVAEAAAGPSQDVEAHQASAQELQSVKDSLNQAETRTKELEGQLENINKVVTERET
ELRNVQEQSSRMQTELNRLRQELQEKTTQEENLRQQMAEKDEKTRKALLVARQKISHVTA
TKEQLQRENEELKQQREELEVRVSALRSNYEGRLSRQERELRDLRGQQERQEQRDEPPEA
GPSKTQEQQRTTEQRQISLKTTPAADRGSTSASEPPTANIKPTPVVATASKQPVNPGNKP
TPRASIRPMITPVPPPTPTATVMPTTQVETQEAMQSTEAPPVEHVTVYGNASGSVRSASP
NVQTTLAGSMLTVQQTQTQATAFVQPTQQQSVTHPEPDNREPSPVTIEATPSSQVEWPST
SSSSSSSVFGTVSATPGTLGMSKRPREEEESSAAAFTEVEATQEEPRAPVAKKLRIIQRV
GPEEEAMADESAEAEGVVPSEDGAEPSQTEFSNLEEAEEDSASQSVPAEPAVTPSQSETP
DHLQQEVIVILTDSESEEEEEEEGEEQDYAEEEEEDEEEEEEEEEEEEDEEDEDDDDGGM
EEEGEESNEGSGDGNEVYEGDETEGADVTDPGTETEESLGASDSTQRPADSQTPSFEGSP
MEALSTEQPITSSGARMPQSPRRPVQQLLPQLNIHPAQSSELGPSAQRIRRQSVGRLNPG
MASSAQHFFEDDDRMVPSIPSLVPPRSEGFDQAIHSPQVAGVPRFRFGLSEDVPQTSSSS
HSDLGQLASQGGLGMYESPLFLATHEEESGGRSVPTTPLQAAAPVTVFSEAAQSDTTEHA
SQSVPMVSTSTPGLVLPGTAGAGEQREIFLEPDTERPSAEASLDAVVSQGDAEEPSQPSD
KANLPSTSQEPSSSSADTVPKSAHHGQSRQLQRFHDSRGGRMKRGGQTFPPRGLHGRRFL
R
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
cgtgtgctgctggctcaggcaacgggagtggctttccctcaacaaggaacaccaccggag
gagttttctctgacatcaaccccccgacgttcaccaacaaccactcccaccactggagct
cccactgcactcgtgaccatggccgagtctgtcgaggtgctggaggccaaggcagcgctg
cggcagttgcaggaagtgttctctgcctacaagaaggagcgtctggaaagcgataaggcg
atgaacgagcagaatgaaaagctgcaggagcagctctctgacctccgctctcaaaatgcc
aaaacatcaactcagctagagtttgcatcaaagaggtatgagatgctgcaggataacgtt
gagggctacaggaaagaaatcgcctcacttagagagaaagaacagaaaacggccgccgcc
acacagaaacttgagcagagtgtccacacgctaaatgaagatctgaaagctgcaaaggag
aaacttaccttgactgagggtcaggctgagaagctgcgcaaggagagagacatgctgaag
ctggtggagtccaggctgaaccaggagaaagagacgtttgtgagccaacagcagaaccag
aacctgctgctgaccaatctccagaccatacaggccactctggagcgttctgaggccgac
gcacgtcagcgtctcaacggccagatcgaaaagcaggaactgcaaatctcccagcttcag
aagaagctggagcaggaagtggaacagcgccatctgtgcagcaggaaccaagaaatccaa
ctaatggacgtcaagaggcagctggagacgcaggtggccttacatcagaaaaccaaagag
ctgctgaatggggccgagttggagctcaacaccctgaggatgcagcaaggccgccccgag
gcacgccacaccctgggctctccacccacacccgtcttcagaggcctgcagggttcagat
caagagagggaggagctccagggccgcctgcagctggctgaaacccgggcagaggaactg
gcagagagcctgagggccgccacctccagcatggagcagtacagagccatggctcaaagc
ttggaggagtccctggagacagagaagcaggtaacggagcaggctcgcctgtcagtggag
gcttctttgaaggaagctcaggagcgacaccggacgctggaagagaaactccaggaagca
gagaaggaaaagcaggacttggaggagagcaagagaaaagacctggcatctctagaggag
cagattaatgacctgaagagaagcctgagcgatgcgcagacagatcaccaggctgtgctg
cagcagctggaagtagttgaagcccacaagcagcaggctctgcaggaccaacaggagcag
gctaagctggccgctgaagctcaagataaatacgagcgggagatgatgctgcatgcagcc
gacgtggaagccctgcaagccgccaaggctcaggctctgcaggccgccgagctcagaaac
cagctggaagagaaagtccagagagtcagcgctgagctgctggaggccagagtctcctgg
gaggtgcaggaaaagatcctcaaggaggaaacatctaagatggaaagtcgctatgaggag
ctgcagaggcagaacaccctcctgcatgagcaggtccaaaccatgagcaccaagatggct
gccaatattcagcgtgccgccaatgagagctcgctgaacgtttctttgagtgaagaggga
aaatctcaagaccagctgcttgagattctcagttttgttcgtcgggaaaaggagatggct
gaatcccggtttgaggtggcgcaaggggagagcttacgtcaccgtctgagagttgaacac
ttggaacgagaacttagggaggtgcaggacagtctgactgctgcaagggagagaatgcag
gtgactgcaaagactctggcccagcatgatgagctgatgaagaagactgaaaccatgaat
atcttagtggagaccaacaagatgctgagagaggagaaaaccaaaatggagcaggaactg
cagcaaactcaagctaaggtgcaaaagatggagtcggacgtctttcctctgcagcaaagc
aactctgagctgagtgagaaaaacggcatgctgcaggcggagaaggcgatcctggaggag
gacataaagcgctggaaagctcgaactcagaatttgctgagtcagcaaaaagattcggac
cctgacgagtacaaacgtctcaacaccgagaaagagctacatctgaaacgcatccagcag
ctcacggaggaaaactctcgacttaaagccgagttgaacaagttaaataacatgacaacg
tcactccagggacaaatgcagaacctgcgtgaaggtatgagtaaagcaaacgatgacaga
actgtgctgaggaaggacctggagactaaaaaccaggaaatccaagaaaaggtgcgaacc
atcacccaggtgaagaaaatcggacgacgctacaagatgcaatatgatgaactaaaggtg
caacatgacaagctcgttgctgaggccgctgcaggcccatcccaagacgtcgaggcacat
caggcttcagctcaagagctgcagagcgtaaaagattccctgaatcaggcagagaccaga
accaaagaactggagggacagctggagaacatcaacaaggtggtcacagagcgggagact
gagctgcgtaacgtccaggaacagtcgtccaggatgcagacagagctgaaccgcctgagg
caggagctgcaggagaaaacgacgcaggaggaaaatctgagacagcagatggccgaaaag
gacgagaaaacacgaaaggcgcttctggttgccagacagaagatcagccatgtcaccgcc
accaaagagcagctgcagcgcgagaacgaggagctgaagcagcagcgtgaggagctggag
gtgcgagtgagcgctctcaggtctaattatgagggccgtctcagccgacaggagcgggag
ctcagagacctgaggggtcagcaggagagacaggagcagagagacgagccccccgaggcg
gggccaagcaagactcaagagcaacaaaggacgacagaacagaggcagatcagtctgaag
acgaccccagctgcagacaggggcagcacaagcgcctctgagccgccgaccgccaacatt
aagccgacacctgtggttgccacggccagcaagcaaccggtcaaccccggcaacaaaccg
acaccccgggcaagcatcagaccgatgataacgcccgtgccgccgccaacacccaccgcc
acagtcatgcccaccacacaggtggagacgcaggaagccatgcagtctaccgaagcgccg
ccggtggagcatgtgaccgtgtacggaaacgccagcggctccgttcgctccgccagtccc
aacgtccagaccaccttggcgggctccatgctgaccgttcagcagacgcagactcaggcc
acggcgttcgttcagccgacgcagcagcagagcgtcacccacccagagccggacaatcgg
gagccgtcgcctgttacgatcgaggccacgcccagttcgcaggtggaatggccttcaaca
tcctcctcctcttcctcatctgtgttcggcactgtttcagcgacacctgggacgttgggc
atgtccaagagacctcgagaggaagaggagagcagcgctgctgcgttcactgaggtggag
gcgacccaggaggaacccagagctccagtggccaaaaagctgcgcatcatccagagggtg
ggaccagaggaggaagcgatggctgacgagagtgcagaggccgagggcgtggtgccatca
gaggatggagcagaaccaagccagacagagttttcaaacctcgaggaagcggaggaagat
tcagcctctcagtcggtcccagcagagccggcggtcaccccaagtcagagtgaaacacct
gaccacctgcagcaggaagtcatcgtcatactgacggactctgaaagcgaggaggaggag
gaggaagagggagaagagcaggactatgcagaggaggaggaggaagacgaggaagaagaa
gaggaggaggaggaagaggaagaagacgaagaagatgaggatgacgatgatggggggatg
gaggaagaaggagaggagagcaacgaaggaagcggtgatggcaacgaagtttatgaagga
gacgagacagagggagctgatgtcaccgacccgggcactgagacagaggagagcttaggg
gcgtcagactccacccagaggcccgccgattcccagacaccaagctttgagggaagccca
atggaggccttgtcaacagaacagccaatcacaagttccggagcgcgtatgccccagtcg
ccgcggcgacccgtgcagcagcttctgccccaactcaacatccatcccgctcagtcttca
gaactgggaccatctgctcagcgaatccgtcgccagtcagtgggccgactcaatcctggc
atggcaagcagtgcgcagcatttctttgaagacgacgacaggatggttcccagcattccc
agtctggttccccctcgctcagaaggctttgaccaggctatccattctcctcaggttgct
ggagtccctcgcttcaggtttggtctttcagaagacgtgcctcagaccagctcctcctct
cactctgacctcggccagctcgcctcgcaaggaggtcttgggatgtatgaaagtcctctg
ttcttggcgactcatgaggaagagtcaggaggccgcagcgttcccaccactccactgcaa
gctgcagctccagtaactgtcttctcggaggctgcacagtctgacacgacggagcacgcc
tcgcagtcggttcccatggtgagcacgtccacgccgggcctggtgctgccaggaaccgcc
ggggccggggagcagagagagatcttcctggagccagacacggagaggcccagtgctgaa
gcgtctctggatgctgtggtgtcgcagggagacgcggaggagccgagccagccatctgac
aaggccaaccttccctccaccagccaggagccttcctccagctctgcagatacagtccct
aaatccgctcatcacggacagtccagacagctgcagcgctttcatgacagccgtggaggt
cggatgaagagaggaggtcaaaccttccctccccgcggcttacatgggagacgatttctg
agatga
DBGET
integrated database retrieval system