Paramacrobiotus metropolitanus: 129584164
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Entry
129584164 CDS
T09028
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129584164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeo03021
]
129584164
Enzymes [BR:
pmeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129584164
Transcription machinery [BR:
pmeo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129584164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Mpp10
BUD22
Motif
Other DBs
NCBI-GeneID:
129584164
NCBI-ProteinID:
XP_055332264
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MEVDTRRVSHAPREVAFGVHSAEEVRAISVLEIKNPVSFDQLGTPVTAGPHDPALGAVER
GEVCPTCYQMSKSCPGHIGHVALPVPVFNPMLFKTLLRILKGSCYSCKLLLCEGRTATNF
ACQIRLIEAGLTNVALDFPLLAKGYLLNNPCRAEEVAEHLNAYVDQLIEGNSTNDQNTID
SATVLKDKQSVVKEFLHRSLGANKKCYFCLGKKWTIRSYFDRKITYVVGGRGARPEGSKS
KPRPNKKNVDLALAAEQQQEEETVPEPEPIPQPEIPADNRAHALSPTEAREYLREVWRKN
SEILADLFGIFDKSLENPTDILFIDALMVSPPKFRPIRVVDGFRYAHAESKNLERIIQCC
NNIRILRSFVKQGASPKIALPEIQQIPGNTMEAKLLEACDRLQVYVSSIADGDADKMNPE
FSNGVKQILEKKEGLFRMHMMGKRVNYSARSVISPDPYLKLNEIGIPEYIALRWTYPAVV
TTNNIDQLRKAVINGPAVHPGADKVINDDGTVTILKADNPKQRMAIAKGLLAGLKAGVTK
KVHRHLINGDIMLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKSYNADFDGDEMNA
HLPQDEVARSEAHSILNASYQYLVPKDGTPLSGLIQDHIVAGVHFTIRGRFFNKADYEQL
VFSALGDLHTSVRFLPPAIWKPAPLWSGKQVISTIVINLVPEGMQPLSLRTASKVPLKSW
QTNQGRNRKRPNFSIALSDDKDMTESDVIFRQGELVCGVLDKAQYGPSSFGLVHACFELY
GGETSAQLLSSFARLFTFFLQLQGFSLGVEDILVAHGADFQRRRIMATVDQCGPEAVAQA
LQLDANSTSPEMLRNHFERAHRAADQSDMKVIDGTVKGMVDKLNNDITRACMPGGLVKEF
PQNQLQTMVMSGAKGATVNCIQMSCLLGQIELEGARPPLMLSGRTHPSFRPYESSPRSGG
FVVQRFATGLRPQEYFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGVVVNYDLTVRN
SDGGIIQFLYGEDGLDIGKTPFFSEKQMPFLISNVNHSTRSEIKRLSKTIDVKTAAVHDR
SVKAWKEETVRLSAKARKKQKLLQKAPDENIALLQLPRISRMSDTGRQNDTVEPTLSACR
PDIHFGSISERLHSIMEKYMKNPPISGKMCQTQSGFKSPEALVQNVVNLKYMKSLCQPGE
AVGALVGQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMTGSKTIKTPTMEVPVK
KGMENEAELLRIRLTRLMFSEMVDYMEMNKYNEAQENDNMETILELYIKFISPEEIVSKT
CITSRKVLMYFEKVVVRQLVKRIRQKGASVKKQTKKGHGNEMDEAVEARGQASGEGGEDG
GEEAAHNEGDDEAESLYSDDEAADPEGGKAQRAADAEYRGDEDDEIVREWEDGEEARMED
EDGPDEHDKENSLRSDSDGDADISADLLASLIPPTPHEGKKSKKRMNAIRTEGVMGVDSW
VKNYRYDPEENNWCRLTLAIPMSSAAADPQSLIESELKKCVVHQVANIRKAFLAKEKNGV
VMLRTEGVNFDYMMQFDEIVDLNRLMSNDIQAVAERFGIEAAAKTIIRECNSVFGAYGID
VNYRHLSLVADYMSRDGVVKAFNRLAIASNASPFQKMSFETSMNFYRDAVVNGARDTLQS
PSAQLVIGERVRVGTGLFSLRAPVRLDN
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatacgagaagagtcagtcatgcgccgcgggaagtggcattcggcgtacat
tctgccgaagaagttcgagccatctccgtgctagaaatcaagaatcctgttagctttgat
cagctgggtactccggttacggcggggcctcacgatccagctctaggcgcggtggaacgc
ggcgaagtgtgtcctacttgttaccagatgagcaaaagctgtccaggacacattgggcat
gttgcgctaccggtgcctgttttcaacccaatgctcttcaagactttgttaaggattctg
aaaggcagttgctattcatgcaagttgcttttgtgcgaagggagaacagccacaaacttc
gcctgccagatcaggttaattgaagcgggacttaccaatgtagcactggattttcctctg
ctggcgaagggctatttgctcaacaatccctgtcgtgctgaagaagttgcggagcattta
aatgcttatgtggatcagctcattgaaggaaattcaacgaatgatcagaatacaattgat
tctgcaactgttttgaaagacaaacagagtgtggtgaaagaattcctgcaccggtctttg
ggcgcgaataaaaaatgctatttctgccttggcaagaaatggactatcaggtcgtatttc
gatcggaaaatcacttacgtggtgggcggaagaggtgctcgcccggaaggaagcaaatcg
aaaccgagacctaataagaaaaacgtggatttggcattagcagccgaacagcaacaggaa
gaagaaacagtccctgaacccgagcctattccgcaaccagaaattcctgcagacaataga
gcgcacgcgttgtcaccaaccgaagcaagggaatacttacgagaagtctggagaaagaac
agcgaaattttagcagatttattcggaattttcgataaatcactagaaaatccaactgat
attctttttattgatgctctcatggtctcgccacctaaatttcgtccgattcgtgtcgtt
gatggatttcgttatgctcacgcggaaagcaaaaatctagagcggattattcaatgttgc
aataatattcggattttaaggagttttgtaaaacaaggcgccagtccaaaaattgcattg
ccagaaattcagcaaattcccggtaacacgatggaagctaaactgctggaagcatgcgac
agattacaggtctacgtgagcagcattgccgatggtgatgccgataagatgaacccggaa
ttttctaatggagtcaaacagatcttggaaaagaaggagggtttatttcgcatgcacatg
atgggaaaacgagtgaattactcagcgcgttctgtcatttcccctgatccttacctcaaa
cttaacgaaatcggaattccggagtacattgccttgagatggacgtatccggcggttgtg
accaccaacaacattgatcaacttcgaaaggccgtaatcaatggacctgctgtgcatccc
ggtgctgataaggtgataaatgatgacggaacggtaacaatattgaaagccgacaatccc
aaacagcgaatggctattgccaagggacttctagcgggattaaaagcgggagtgacgaag
aaggttcatcgtcatcttattaacggtgacattatgctgttaaaccgtcaaccaaccctg
cacaaacccagtattatggcacacaaggcccgtatcctgaaaggagaaaaaaccttgcgt
ttgcattatgccaactgcaagtcttacaatgccgattttgatggggatgaaatgaacgcc
catcttccgcaagacgaagtcgcacgatcggaagctcattcgatactgaacgctagttat
cagtatcttgtaccgaaggatggtacgcctctcagtggtctcattcaggatcatatcgtt
gctggagttcatttcaccattcggggacgtttcttcaacaaagcagattatgagcaactt
gtgttttcggctttgggggatttgcatacttctgtccggtttcttccccctgcgatctgg
aaacctgcgcctttatggtcaggaaaacaggtaatttcaactatagtgataaatctcgtg
ccagaaggaatgcaacctttgtccctccgaaccgctagcaaagtcccactgaaaagttgg
cagactaatcaaggaagaaaccggaaaaggccaaattttagtatagccttgagcgacgac
aaggatatgacggaaagcgacgtcatatttcggcaaggagaactggtctgtggagtttta
gacaaggcgcagtatggtccgtcatctttcggacttgtgcacgcttgtttcgagctgtat
ggcggagagacttcagctcagctactcagcagctttgcccgattgttcacgttcttcctt
caactgcaaggttttagtttgggagtggaggacatcttggttgcccatggtgctgatttt
cagcggcgtcgaattatggcgacagtggatcagtgtggaccggaagctgtggcgcaagcg
ctgcaactggatgctaattctacatcgccggaaatgctaagaaatcacttcgaaagggca
caccgtgccgcagatcagagcgacatgaaggttattgatgggacagtgaaaggcatggtt
gataagttgaataacgatattacacgcgcttgtatgcctggtggtttggttaaagaattc
ccgcaaaatcagctgcagactatggttatgtccggtgcaaagggtgcaacggtgaactgc
attcagatgtcgtgtcttcttgggcaaattgagcttgaaggcgctcgcccgcccttaatg
ttaagcggtcgaacgcatccgtcattccggccgtacgagtcgtcgccgcgatctggagga
tttgtagtgcaaagattcgccactggtttgaggccgcaggaatattttttccattgcatg
gctggtcgcgaaggtcttatcgatactgcagtcaaaactagtcgaagtggctaccttcag
agatgccttatcaaacatttggagggggttgtggttaattatgatctgacagtgcgtaac
agtgacggtggtatcatccagtttttgtatggagaagatggactggatattggcaaaact
ccgttcttttcggagaaacaaatgccattcctgatctcaaacgttaatcattccaccaga
tctgaaataaaaaggctgtcgaaaactatcgatgtcaaaacagccgctgtccatgatcgc
tcggtgaaagcatggaaggaggaaacagttagactgtcggcaaaagccagaaaaaagcag
aaactattgcaaaaggcaccagatgaaaatattgccttgctacagctgccacggatcagt
cggatgtcggatacaggaagacagaatgacactgtcgaacctacgttgtcggcttgtcga
ccggatatccattttgggtctatatccgagcgactgcattcaattatggaaaagtacatg
aagaacccgcccatttcggggaagatgtgccagacacagtcgggcttcaagtctccagaa
gcactggttcagaatgtggtaaatttgaagtatatgaagtctctgtgtcaacctggagag
gcggtgggggcacttgtgggtcagtccattggggagccttcgacgcagatgaccttgaat
acgttccattttgccggtcgcggagaaatgaacgtaacgcttggtatacctcgactccga
gaaatcttgatgactgggagtaagaccattaaaactcccactatggaggttccggttaaa
aagggaatggaaaacgaggcggagttgttaaggattcgtctgaccagattgatgttttcg
gagatggtggattatatggaaatgaataaatacaacgaagctcaagaaaatgataacatg
gaaacgattctggaattgtatataaaatttatttctccggaggaaattgtgtcgaaaaca
tgcataacctcccgcaaagttctcatgtacttcgaaaaagtggtcgtaaggcagctcgtt
aaacggattcgccagaaaggggcttcagtgaaaaagcagaccaagaagggccatggaaat
gaaatggacgaggcagtggaggcgcgaggtcaggccagtggtgaaggtggtgaggatggc
ggggaggaggcagcacataacgaaggagacgacgaagcggaatctctgtattcggacgat
gaagcagcggatcccgagggtggtaaagcgcagagggcagcggatgctgagtacaggggc
gacgaagatgatgagattgttcgcgagtgggaggatggagaagaagccagaatggaagac
gaagacggtccagatgaacacgacaaagaaaattccctgcgaagcgattctgatggggac
gccgatataagtgcggacttgttagcaagtttgattccgccaactcctcatgaaggaaaa
aaatctaagaagaggatgaacgccattcgtaccgaaggagtaatgggtgtggattcgtgg
gtgaaaaattatcgttatgatccggaagagaataactggtgtcggcttacgttggccatt
cccatgtccagtgcggctgccgatcctcagtcgctaattgaatccgaactgaagaaatgc
gttgtgcatcaggtggccaacatccgtaaagcctttctggccaaggagaagaatggtgtt
gtgatgctgcgaacggaaggtgtcaatttcgattacatgatgcagtttgatgaaattgtg
gacctgaatcgactcatgtccaatgatatccaagcagtggcggagcgcttcgggatagaa
gcggcagccaagaccataatccgggagtgcaatagcgtattcggcgcatacgggatcgat
gtcaattatcggcatttgtctttggtggctgattatatgagtcgggatggcgtggttaaa
gcgtttaatcgattggccattgccagtaatgcgtcaccgttccagaaaatgagttttgaa
acatccatgaatttttaccgggatgctgttgtcaacggagcccgggatacccttcaaagt
ccatctgctcagctggttatcggagaacgcgttcgcgtcggtaccggtttattttcgctg
cgagcgcccgtacggttggataactaa
DBGET
integrated database retrieval system
