Parabacteroides merdae: INE87_02291
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Entry
INE87_02291 CDS
T07751
Symbol
gcdB_2
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00362
Benzoate degradation
pmer00620
Pyruvate metabolism
pmer00650
Butanoate metabolism
pmer01100
Metabolic pathways
pmer01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
INE87_02291 (gcdB_2)
00650 Butanoate metabolism
INE87_02291 (gcdB_2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
INE87_02291 (gcdB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmer02000
]
INE87_02291 (gcdB_2)
Enzymes [BR:
pmer01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
INE87_02291 (gcdB_2)
Transporters [BR:
pmer02000
]
Other transporters
Primary active transporters [TC:
3
]
INE87_02291 (gcdB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
QUT49809
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All DBs
Position
2715023..2716258
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AA seq
411 aa
AA seq
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MNEIFQNLYEMTAFSNIIAEPQFLIMYAIAFILLYLGIKKQYEPLLLVPIAFGVLLANFP
GGDMGVIQADENGMINVHGVMKNIWEMPLHDIAHELGLMNFIYYMLIKTGFLPPIIFMGV
GALTDFGPMLRNLRLSIFGAAAQLGIFTVLLVAILMGFTPKEAASLGIIGGADGPTAIFT
TIKLAPHLLGPIAIAAYSYMALVPVIIPLVVKLLCSKKELSINMKEQEKKYPSTTEIKNL
RVLKIIFPIVVTTVVALFVPSAVPLIGMLMFGNLVKEIGTNTSRLFDAASNSIMNAATIF
LGLSVGATMTAEAFLNFTTIGIVIGGFLAFALSIAGGIFFVKLFNLFTKKKINPLIGATG
LSAVPMASRVANEIALKYDPKNHVLQYCMASNISGVIGSAVAAGVLISFLG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatatttcaaaatctatatgagatgactgcgttcagcaacatcattgctgaa
ccgcagtttctgatcatgtatgccattgcgttcatactgctttatttgggtatcaaaaaa
cagtatgaaccgctgctgctcgtaccgatcgcattcggcgtgttgcttgccaacttcccc
ggaggcgatatgggtgtgatacaggccgacgaaaacggcatgatcaacgtgcacggagtg
atgaagaacatttgggagatgccgctccatgacatcgcgcatgagttggggctgatgaac
ttcatttactacatgctgatcaagacggggttccttcctcctatcatctttatgggtgta
ggggcgttgacagatttcgggccgatgctgcgcaacctgcgtctgtccatattcggggcg
gcggcacagctgggtattttcaccgtgctgctggtagccatcctgatgggattcacgcct
aaagaagctgcttctttaggaattatcggaggagcggacggaccgactgccatcttcacg
accatcaaactggccccccatctgttaggaccgatagcgattgccgcttattcctatatg
gcgctggttccggttatcatcccactggtagtcaagctactttgttcaaagaaagagcta
tccatcaatatgaaggaacaggaaaagaaatacccgtccaccacggaaatcaaaaatttg
cgtgtcttgaagatcatcttcccaatcgtagtgacgacggtagtggccctgttcgtgccg
agtgcagtgccattgatcggtatgctgatgttcggtaacctggtcaaagagatcggaacc
aatacatcccgcctgttcgatgctgcatcgaacagcatcatgaatgcagcgaccatcttt
ttaggattatcggtcggcgcgaccatgacggccgaggcgttcctgaacttcacgacaatc
ggtatcgtaatcggaggcttccttgcattcgccctttccatagcgggcggcatcttcttc
gtcaaactgttcaacctcttcacaaagaagaaaatcaacccgctgatcggagcaaccgga
ctgagcgccgtaccgatggcatcccgcgtggcaaatgagatagcattaaaatacgacccc
aagaaccatgtgcttcaatattgcatggccagcaacatctccggcgttatcggttctgcc
gtagccgccggcgtattgatctcgttcttaggataa
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