Parabacteroides merdae: INE87_02885
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Entry
INE87_02885 CDS
T07751
Name
(GenBank) Alanine racemase, N-terminal domain
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00300
Lysine biosynthesis
pmer00470
D-Amino acid metabolism
pmer00550
Peptidoglycan biosynthesis
pmer01100
Metabolic pathways
pmer01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
INE87_02885
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
INE87_02885
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
INE87_02885
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
INE87_02885
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmer01011
]
INE87_02885
Enzymes [BR:
pmer01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
INE87_02885
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
INE87_02885
Peptidoglycan biosynthesis and degradation proteins [BR:
pmer01011
]
Precursor biosynthesis
Amino acid ligase
INE87_02885
Racemase
INE87_02885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Motif
Other DBs
NCBI-ProteinID:
QUT50394
LinkDB
All DBs
Position
complement(3516748..3519213)
Genome browser
AA seq
821 aa
AA seq
DB search
MEYSIKEIAGIIGADAPKLYDAPVSILLTDSRRLSFPEQSLFFALQTKTNDGHNYIQGLY
KLRVRNFVVSTFLPEFESMPEANFLVVKDTLKALQKLAAHHRKRFNIPVIGITGSNGKTI
VKEFLYQLLHNEFNIVRSPRSYNSQLGVPLSVWQMSDKNTLGIFEAGISQPDEMERLQPI
IAPTIGVITNIGEAHQENFISSTQKCLEKLTLFNDCEAIIYDGDDAFIANCIESACLSHK
AITWSRTDSEAPLYIESIKKLDSETIIRCTLLGFDRTYTIPFTDDASIENAIHCMAVMLY
LKPTSVNDIEKFKRLEPVAMRLDVKQGINNCLLINDTYNSDINSLDIALDFQQSRRVEKN
LKCTLILSDILQSGTLPKSLYKKVADLVRRKKIDRIIGIGRDLKEYGGAFDIEKEFYLTT
DEFIKSPSFKKFKDELILIKGSRQFHFERISELLEKKVHETILEVNLDAVVHNFNYYRSK
LKPETKMVCMVKAFGYGAGSYELAKTLQEHRCDYLAVAVADEGEELRKEGISIPLIVMNP
EFSSFNVLFENQLEPEVYSFRLLDAMIKETERRGITSYPIHIKIDTGMHRLGFQPEDVPE
VCRRLKEQSGVVARSVFSHLVGSDSYIFDDFTKKQLDTFTRVAAELEAGLEYKVIKHILN
SAGIERFTDYQMDMVRLGIGLYGVSASGQKGLRNISTLKTTILQIQNVPAGDSIGYSRMS
YVKRDSRIAIIPIGYADGLDRHFSNGGGEVVINGHRCPIIGNICMDACMIDVTDTDAHEG
DSVIIFGEELPVSELSDKLKTIPYEILTSISPRVKRVYYRE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggaatattcaattaaagaaatcgccgggataattggagctgacgccccaaaattatat
gacgctcctgtcagtatattgcttaccgacagccgccgtctttcattccccgagcaaagt
ctattctttgccctccagacaaagaccaacgacggacataattatatacaaggattatat
aaattacgtgtacgcaacttcgtagtcagcacttttttaccggagttcgaatcgatgcct
gaagcaaacttccttgtcgtcaaggatacactgaaagcactccagaagttagcggcccat
caccggaaacgtttcaatattccggtaatcggcattacgggaagcaacgggaaaacgatt
gtaaaagagtttctttatcaattattgcacaacgagttcaacatcgtccgctccccccgg
agctacaactcgcaattgggggttccgctgtcggtatggcagatgagcgacaaaaataca
ttaggcatcttcgaagcaggcatttcccagccggacgaaatggaacgccttcaaccgatc
atcgcaccaaccatcggcgtaatcacaaacataggggaagcgcatcaggagaactttatc
tcttccacgcagaaatgtctagaaaagctgacgttgttcaacgactgcgaagcaatcatc
tatgatggcgacgatgcttttatcgccaactgcatcgagtcggcctgcctgtcccacaaa
gcaatcacttggagtcggacagactcggaagcccctttgtatatcgaatcgatcaagaaa
ctggattccgaaaccattatccgctgcacgcttttaggtttcgaccggacatacacgatt
ccttttacggacgacgcttctatcgaaaacgccatccactgtatggccgtgatgttgtat
ctgaaaccgacaagcgtaaacgatatcgaaaaattcaagcgcctcgaaccggttgccatg
cgcttggacgtaaagcagggtatcaacaactgcctattgataaacgacacctataattcg
gatatcaattctttggatatcgccctcgacttccaacagagccgccgcgtagagaagaat
ttaaaatgcacactaatcctttcagacatcctgcaatcgggaacgttgccgaagtctctt
tataagaaagttgcggacttggtgcgcagaaagaagatcgatcgcattatcggtatcggc
cgtgacttgaaagagtacggaggtgctttcgatatcgaaaaagaattttacctgacaacg
gatgaattcatcaagtctccgtctttcaaaaagttcaaagacgaattgatcctgataaaa
ggctcccgccaatttcatttcgaacgtatatccgagctgctggaaaagaaagtgcatgag
acgatcttggaagtgaacctggatgccgttgtccataacttcaactattaccgctcaaag
ctgaagccagaaactaaaatggtctgcatggtcaaggctttcggatacggagccggttcc
tatgaactggcaaagacactgcaagaacatcgttgcgactacctggctgttgccgttgcc
gacgaaggagaagaactgcgcaaggagggcatctcgatcccgcttatcgtcatgaatccg
gaattcagcagcttcaatgtcttgtttgaaaaccagctggagccggaagtgtacagtttc
cgtctgctcgacgcaatgataaaagagacggaacgcaggggcatcacctcttatccgatc
catatcaagatcgacacgggaatgcaccgtttaggcttccagccggaagatgtaccggag
gtttgccgtcgcctgaaagaacagagcggcgtagtagctcgctccgtattctcacatctc
gtaggcagcgactcctatatcttcgacgatttcacaaaaaagcaactggatacgttcacc
cgcgtggcagcagaactggaagccgggttggaatacaaggtgatcaagcatatcctgaac
tcggccggaatagaacggttcaccgattatcagatggatatggtacgtctcggcatcggc
ctgtatggagtcagtgcctccggtcagaaagggttgcgtaacatcagcacgctgaagacg
actatcttgcagatacaaaacgttccggcaggcgattccatcggctacagccggatgagc
tatgtaaagcgcgattcccgcatcgcgattatcccgatcggttatgccgacggcttggac
cgtcatttcagcaatggtggtggcgaggtcgtgattaatggccaccgttgcccgatcatt
ggcaatatctgtatggatgcctgcatgatcgatgtcaccgataccgacgcacacgaagga
gactccgtcatcattttcggcgaagaactccctgtcagcgaactttcggacaaactaaag
accatcccatacgagatacttacctctatctcgccgagggtaaaaagagtgtactacagg
gaataa
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