Proteus mirabilis BB2000: BB2000_3186
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Entry
BB2000_3186 CDS
T02789
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pmib
Proteus mirabilis BB2000
Pathway
pmib00540
Lipopolysaccharide biosynthesis
pmib01100
Metabolic pathways
pmib01250
Biosynthesis of nucleotide sugars
Module
pmib_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BB2000_3186 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pmib01005
]
BB2000_3186 (rfaD)
Enzymes [BR:
pmib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BB2000_3186 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pmib01005
]
Core region
BB2000_3186 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
KR
Ldh_1_N
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AGS61629
LinkDB
All DBs
Position
complement(3476712..3477650)
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AA seq
312 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDEGYTDILVVDNLKDGTKFVNLVDLNIADYMDKEDFIASI
VAGDDFGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLDRQIPFLYASSAATY
GGRTDHFIEERKYEAPLNVYGYSKFLFDEYVRQILPEAQSMVCGFRYFNVYGPREGHKGS
MASVAFHLNTQVNDGQNPKLFEGSETFQRDFIYVGDVAAVNLWFWRNNVSGIYNCGTGRA
ESFQAVADAVIAYHNDKELSVEHIEFPEKLKGRYQAFTQADLTNLRKAGYSAPFKTVAEG
VALYMQWLNQDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggcggtgcaggttttatcggcagcaatattgttaaagcattaaat
gatgaaggttataccgatattttagtggttgataacctaaaagatggcacaaaatttgtg
aatcttgtcgatcttaatatcgctgactatatggataaagaagactttattgccagtatt
gtagccggtgatgattttggtgatattgatgccgtattccatgaaggagcatgctcttct
actaccgaatgggatggcaaatatatgatggataataactatcaatattctaaagagtta
ctgcattattgcctcgatcgccaaattcctttcttatatgcctcttctgctgccacttat
ggtggccgtactgatcattttattgaagaaagaaaatatgaagccccacttaatgtgtat
ggctactctaaattcttatttgatgaatatgtgcgccaaattttgcctgaagcacaatct
atggtgtgtggtttccgttatttcaatgtgtatggcccccgtgaaggacataaaggtagt
atggccagtgtcgccttccatttaaatacacaagtcaatgacgggcaaaatcccaaatta
tttgaaggtagtgaaaccttccaacgtgactttatttatgtgggtgatgtggctgcggtt
aatttatggttctggcgcaacaatgtctccggtatttataattgtggtaccggccgcgca
gaatcgttccaagccgtggctgatgcagttatcgcttatcataacgataaagagctttct
gtggagcatattgaattccctgagaaactcaaaggtcgttatcaagcctttacacaagct
gatctgacaaatttacgcaaagcaggctacagcgccccttttaaaacggtcgcagaaggt
gttgctctttatatgcaatggttaaatcaggataagtaa
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