KEGG   Pseudomonas mendocina NK-01: MDS_1162
Entry
MDS_1162          CDS       T01473                                 
Name
(GenBank) trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk00250  Alanine, aspartate and glutamate metabolism
pmk00330  Arginine and proline metabolism
pmk01100  Metabolic pathways
pmk01110  Biosynthesis of secondary metabolites
Module
pmk_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    MDS_1162
   00330 Arginine and proline metabolism
    MDS_1162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmk03000]
    MDS_1162
Enzymes [BR:pmk01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     MDS_1162
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     MDS_1162
Transcription factors [BR:pmk03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    MDS_1162
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH RHH_1
Other DBs
NCBI-ProteinID: AEB57193
LinkDB
Position
complement(1265096..1269031)
AA seq 1311 aa
MATTTLGVKLDDATRERLKKAAAQIDRTPHWMIKQAIFNYLEQVESGLTPAEHAGLAAAA
GEEALESLTEQGLQVFLDFAESILPQSVLRAAITSAYRRPETEVVPMLLEQARLNPQQAE
ASQKLALGIAEKLRNQKNASGRQGLVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRD
ALIRDKIANGNWSQHLGQSPSMFVNAASWGLLITGKLVSTHTEAGMTSALNRIIGKSGEP
VIRKGVDMAMRLMGEQFVTGETIAEALANASNLEAKGFRYSYDMLGEAALTEEDAKRYLA
SYEQAIHAIGKASHGRGIYEGPGISIKLSALHPRYSRAQYERVMDELYPTLLGLTQLAKQ
YDIGINIDAEEADRLELSLDLLERLCFEPSLAGWNGIGFVIQAYQKRCPYVIDYVIDLAK
RSRHRLMIRLVKGAYWDSEIKLAQVNGLEGYPVYTRKPYTDLSYIACARKLLAAPEAIYP
QFATHNAHSLSAIYHLAGQNYYPGQYEFQCLHGMGEPLYEQVVGKIADGKLNRPCRIYAP
VGSHETLLAYLVRRLLENGANTSFVNRIADHSISLKDLVLDPVQQVEQMAAQEGTVGLPH
PRIPLPRDLYGKQRVNSAGLDLANEHRLGSLSSALLSTVNHSYLAEPMLGCDGANPGEPE
PVRNPADHRDLVGHVREASVKDVDSAILCALASGQIWQSTLPAERAAVLERAADLMEAEL
QQLMGLLVRESGKTFANAIAEVREAVDFLRYYAIQARSFGNDSHRPLGPVVCISPWNFPL
AIFTGQVCAALAAGNTVLAKPAEQTPLIAAQAVRILREAGVPAGAVQLLPGRGETVGARL
VGDERVRGVMFTGSTEVAGILQRNIAGRLDAQGRTIPLIAETGGLNAMIVDSSALTEQVV
MDVVASAFDSAGQRCSALRVLCVQDDVADRVLTMLKGAMAEYTLGNPERLNTDIGPVIDA
EAKAGIETHIAKLREKGRKVTQLARVNGDEIKRGTFVVPTLIELDSFDEMKREIFGPVLH
VVRYQRADLGKLLQQINDSGYGLTLGVHTRIDETIAQVVGTAKVGNLYVNRNMVGAVVGV
QPFGGEGLSGTGPKAGGPLYLYRLLSTRPQEAVAQYLQQAEVQALPAPTELDNVRAAFAE
WAGKQEPAVAALFEQYRGLSQSYSSHALTGPTGERNSYTLLPREHVLNLADERSDLLTQL
AATLAVGSQAIWLESQRALYSELPKEVQKHIQLVADWNSVDVELDAILHHGDSDQLRAVS
EQAAQRKGAIVGVHGLNKGETDIALERLLIEHALSVNTAAAGGNASLMTIG
NT seq 3936 nt   +upstreamnt  +downstreamnt
atggctactaccactcttggcgtgaaactcgacgatgccacccgcgagcgcctgaaaaag
gccgctgcgcagatcgaccgcacgccgcactggatgatcaagcaggcgatcttcaattat
ctggagcaagtcgagagtggcctgacgcctgccgagcatgctggcctggccgctgccgcc
ggtgaagaagcactggagtcgctgaccgagcagggcctgcaggtgttcctcgacttcgcc
gagagcatcctgccgcagtcggtgctgcgcgccgccatcaccagcgcctaccgccgcccg
gaaaccgaagtggtgccgatgctgctggagcaggcgcgcctgaacccacagcaggccgag
gcctcgcagaaactggctctcggcatcgccgagaagctgcgtaaccagaagaacgccagc
ggccgtcagggcctggtgcagggcctgctgcaggagttctcgttgtcgtcgcaggaaggc
gtggccctgatgtgcctggccgaagccctgctgcgcatccccgacaaggccacccgcgat
gccctgattcgcgacaagatcgccaacggcaactggagccagcacctcggccagagcccg
tcgatgttcgtcaacgcggcgagctggggtctgctgatcaccggcaagctggtgtcgacc
cacaccgaagccggcatgacctcggcactcaaccgcatcatcggcaagagcggcgaaccg
gtgatccgcaagggcgtggacatggccatgcgcctgatgggtgagcagttcgtcaccggc
gaaaccatcgccgaagccttggccaacgcctccaacctggaggccaagggcttccgctac
tcctatgacatgctcggcgaagcggcgctgaccgaggaagacgccaagcgctacctggcc
tcctacgagcaggccatccacgccatcggcaaggcctcgcacggtcgcggcatctacgaa
ggcccgggcatctcgatcaagctttccgccctgcacccacgctacagccgcgcccagtac
gagcgcgtgatggacgagctgtatccgaccctgctgggcctgacccaactggccaagcag
tacgacatcggcatcaacatcgacgccgaggaagccgaccgcctggagctgtcgctggat
ctgctcgagcgcctgtgcttcgagccgagcctggccggctggaacggcatcggcttcgtc
atccaggcctaccagaagcgctgcccgtacgtgatcgactacgtcatcgacctggccaag
cgcagccgccaccgcctgatgatccgcctggtgaaaggcgcctactgggacagcgagatc
aagctggcccaggtcaatggcctggaaggctacccggtgtacacccgcaagccgtacacc
gacctctcctacatcgcctgtgcgcgcaaactgttggccgcgccggaagccatctacccg
cagttcgccacgcacaacgcccactcgctgtcggccatctatcacctggccgggcagaac
tactacccgggccagtacgagttccagtgcttgcacggcatgggcgagccgctgtacgag
caagtggtcggcaagatcgccgatggcaagctgaaccgcccgtgccgcatctacgccccg
gtcggcagccatgaaaccctgctggcctacctggtacgtcgcctgctggaaaacggcgcc
aacaccagcttcgtcaaccgcatcgccgaccacagcatctcgctgaaagacctcgtactc
gatccggtgcagcaggtcgagcagatggccgcgcaggaaggcaccgtcggcctgccgcac
ccgcgtatcccgctgccgcgtgatctgtacggcaagcagcgggtcaactccgccggcctc
gacctggccaacgaacaccggctcggctcgctgtcctcggcgctgctgtcgaccgtcaac
cacagctacctggccgagccgatgctcggttgcgatggcgccaatccgggcgagccggag
ccggtgcgcaacccggccgatcatcgcgacctggtcggccatgtgcgcgaagccagcgtc
aaggacgtcgacagcgccattctctgcgccctggccagtgggcagatctggcagtccacc
ctgcccgccgagcgcgccgccgtgctggaacgcgccgccgacctgatggaagccgagctg
cagcagttgatgggcctgctggttcgcgagtccggcaagaccttcgccaacgccatcgcc
gaggtgcgcgaggcggtggacttcctccgctactacgccattcaggcacgcagcttcggc
aacgacagccaccgcccgctgggcccggtggtgtgcatcagcccgtggaactttcccctg
gcaatcttcaccggccaggtctgcgccgcactggccgccggcaacaccgtgctggccaag
ccggccgaacagaccccgctgatcgccgcccaggccgtgcgcatcctgcgcgaggccggc
gtgccggccggcgcagtgcaactgctgccgggtcgtggcgaaacagttggtgcgcgcctg
gtgggtgacgagcgcgtgcgtggcgtgatgttcaccggctccaccgaagtggccggcatc
ctccaacgcaacatcgccggtcgcctggatgcccagggccgcaccattccgctgatcgcc
gaaaccggcggcctcaacgccatgatcgtcgattcctcggcgctgaccgagcaggtggtg
atggacgtggtcgcctctgccttcgacagcgccggccagcgctgctcggcgctgcgcgtg
ctgtgcgtgcaggacgacgtggccgaccgcgtgctgaccatgctcaagggcgccatggcc
gagtacacactcggcaacccggagcgcctgaacaccgacatcggcccggtgatcgacgcc
gaagccaaggccggcatcgaaacccatatcgccaagctgcgcgagaaaggccgcaaggtc
actcaactggcgcgcgtcaacggtgacgagatcaagcgcggcaccttcgtcgtgccgacc
ctgatcgagctggacagcttcgacgaaatgaagcgcgagatcttcggcccggtactgcac
gtggtgcgctaccagcgcgcggatctgggcaagctgctgcagcagatcaacgacagcggc
tacggcctgaccctcggcgtgcacacgcgcatcgacgagaccatcgcccaggtggtcggc
accgccaaggtcggcaacctgtatgtgaaccgcaacatggtcggcgccgtggtcggcgtg
cagccgttcggtggtgaaggcctgtcaggcaccggcccgaaagccggcggcccgctatac
ctctatcgcctgctgtcgacccgcccgcaggaggccgtcgcccagtacctgcaacaggcc
gaagtgcaggcactgccagcaccgaccgagctggacaatgtacgcgccgccttcgccgag
tgggcaggcaagcaggagccggccgtcgccgcactgttcgagcagtaccgtggcctgtcg
cagagttacagcagccacgccctcaccggcccgaccggcgagcgcaacagctacaccctg
ctgccgcgtgagcacgtactgaacctggccgacgaacgcagcgacctgctgacgcaactg
gctgccaccctggcagtcggcagccaggcgatctggctggaaagccagcgcgccctttac
agcgagctgccgaaggaagtgcagaagcacatccagctggtggccgactggaacagcgtc
gacgtggagctggacgccatcctgcaccacggcgactccgaccagttgcgcgcagtcagc
gagcaagccgcgcagcgcaagggtgccatcgtcggtgtacacggcctgaacaagggcgag
accgatatcgccctggaacgcctgctgatcgagcacgccttgagcgtcaacaccgcagcg
gccggcggcaacgccagtctgatgaccatcggctga

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