Pseudomonas mendocina NK-01: MDS_2024
Help
Entry
MDS_2024 CDS
T01473
Name
(GenBank) carbamoyl-phosphate synthase L chain, ATP-binding protein
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00907
Pinene, camphor and geraniol degradation
pmk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MDS_2024
Enzymes [BR:
pmk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
MDS_2024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
ATP-grasp_3
MCC_alpha_BT
UPF0150
Motif
Other DBs
NCBI-ProteinID:
AEB58055
LinkDB
All DBs
Position
complement(2234605..2236593)
Genome browser
AA seq
662 aa
AA seq
DB search
MPAFNKILIANRGEIACRVMRTAIELGYRTVAVYSEADADARHVQIADEAVCIGPAQVNQ
SYLRIDAIIEAARKTGADAIHPGYGFLSENADFARACEAAGIVFIGPTVEAIHLMGSKRL
SKIAMLEAGVPCIPGYEGAAQDDETLASEAERIGYPLMIKASAGGGGRGMRLVHESAELL
GQIRTARSEAQNAFGSGELILERAVIRPRHVEIQVFGDQHGNIVYLGERDCSVQRRHQKV
VEEAPCPVMTPELRKAMGKAAVKAAASVNYVGAGTVEFLLDASGEFFFLEMNTRLQVEHP
VTELITGQDLVAWQIRVAEGQPLPLLQDDIRLTGHAMEVRLYAEDSAAGFLPQTGQVLRW
EPELLAGVRIDHGLVEGQAVTPFYDPMLAKVIAYGETRDEARRKLVRAVEQCVLLGVNGN
QRFLANLLKNPEFAAGNATTAFIAEHFADDPSLHPHTASLAELAMAAALLYQVSADARAH
QPGLSGWRSAGSAPWRFVLKQGEHKHTVELDVLASGAQAHLCVRRGEEQLSLLLLASDGR
WLTLELDGVRRRQAYHIEGEHLWLYGEHGNLELVDVTHEPAGGQNAASSGAVKAPMDGAI
VDVLIAEGASVSKGQLLVVLEAMKMEHPLKAGVDGIVRRVGVSQGDQVKNRQLLVEIEAV
GA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcattcaacaagatcctgatcgccaaccgcggcgagatcgcctgccgggtgatg
cgcaccgccatcgaactcggctaccgcaccgtggcggtgtactccgaggccgatgccgac
gctcgccacgtacagatcgccgacgaagccgtgtgcatcggcccggcccaggtcaaccag
tcctacctgcgcatcgacgccatcatcgaggccgcgcgcaagaccggcgccgacgccatc
caccccggctatggttttctctccgagaacgccgatttcgcccgcgcttgtgaagcagcc
ggcatcgtctttatcggcccgaccgtggaagccatccacctgatgggcagcaagcgcctg
tccaagatcgccatgctcgaagccggcgtgccctgcatccccggctacgagggcgccgct
caggatgacgaaaccctggccagcgaagccgaacgcatcggctacccgctgatgatcaag
gcgagcgccggtggtggtggtcgcggcatgcgtctggtgcacgaatccgccgaactgctg
gggcagattcgcaccgcccgctcggaggcgcagaatgccttcggctccggcgagctgatt
ctcgaacgcgcggtgatccgcccacgccacgtggaaatccaggtcttcggcgaccagcac
ggcaatatcgtctatctcggcgagcgtgactgctcggtgcaacgccgccaccaaaaggtg
gtcgaggaagcaccctgcccggtgatgacgccggagctacgcaaagccatgggtaaagcg
gcggtcaaggctgcagcttcggtcaactacgtcggcgccggcaccgtggaatttctgctc
gacgccagcggcgaattcttcttcctggaaatgaacacacgcctgcaggtcgagcacccg
gtgaccgagctgatcaccgggcaggatctggtggcctggcagattcgcgtagccgagggc
cagcccctgccgctgctgcaggacgacattcgcctcaccggccatgccatggaagtgcgc
ctgtacgccgaggattcggccgccggcttcctgccgcaaaccggccaggtgctgcgttgg
gagcccgagctgctggccggtgtgcgcatcgaccacggcctggtcgaaggccaggccgtc
acgcccttctacgatccgatgctggccaaggttatcgcctacggcgaaacccgcgacgag
gcccggcgcaagctggtgcgcgcggtcgagcagtgcgtgctgctcggggtcaacggcaac
cagcgcttcctcgccaacctgctcaagaatccggagttcgctgccggcaacgccaccacg
gccttcatcgccgagcatttcgcggatgaccccagcctgcatccgcataccgccagcctg
gccgagctggccatggccgctgccctgctctaccaggtctcggccgacgcccgtgcgcac
cagcccggcctgtccggctggcgcagcgccggcagcgcgccctggcgtttcgtcctcaag
cagggcgaacacaagcacactgtggagttggacgtgctcgccagcggtgcccaagcgcac
ctttgcgtgcgccggggcgaagaacaattgtccctgctcctgctggccagcgacggtcgc
tggttgaccctggaactcgacggcgtgcgccgccgccaggcctaccacatcgaaggcgag
cacctgtggctgtatggcgagcacggcaacctagaactggttgatgtcacccacgagcca
gccggtgggcagaacgccgccagcagcggcgcggtgaaggcaccgatggatggcgccatc
gtcgacgtgctgatcgccgagggtgccagcgtcagcaagggacaactgctggtggtgctg
gaggcaatgaaaatggagcacccactcaaggctggcgtcgacggcatcgttcgccgcgtc
ggcgtaagccagggcgaccaggtgaagaatcgccagttgctggtggaaatcgaagctgta
ggggcctga
DBGET
integrated database retrieval system
