Pseudomonas mendocina NK-01: MDS_3111
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Entry
MDS_3111 CDS
T01473
Name
(GenBank) cobyrinic acid a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00860
Porphyrin metabolism
pmk01100
Metabolic pathways
pmk01240
Biosynthesis of cofactors
Module
pmk_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MDS_3111
Enzymes [BR:
pmk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
MDS_3111
6.3.5.11 cobyrinate a,c-diamide synthase
MDS_3111
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Motif
Pfam:
GATase_3
CbiA
AAA_26
SNO
DUF5586
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
AEB59142
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Position
complement(3434645..3435937)
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AA seq
430 aa
AA seq
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MNARHCPALLIAAPASGQGKTTVTAALARLHTRQGRRVRVFKCGPDFLDPMIHARASGAP
VYQLDLAMVGEAESRRLLWQAAGEADLILIEGVMGLFDGKPSAADLARHFGVPVLGVIDG
AAMAQTFGALAHGLATFQPDLPFAGVLGNRVASTRHGDILRDALPPSIRWFGALPRSASV
ELPSRHLGLVQAAELADLDGRLDAAADALAATADVDLPPAVSFAAPVIEPLPELLAGVRI
GVARDAAFAFLYQANLDLLQALGAELRYFSPLADSELPEVDSLYLPGGYPELYLSELESN
QAMADAIRVHHQAGKPLLAECGGMLYLLDELRDKQGSSGRMLGLLSGSAALQPRLTALAL
QEVTLPEGELRGHSYHHSRLESPLEPVAQGRCPNGKPVAEAVYRLGRLTASYIHFYLPSN
PEAAAALLRP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacgtcactgcccggcgctgttgatcgccgcccccgcgtctggtcagggcaag
accaccgttactgctgccctggcgcgcctgcatacgcgtcaggggcgtcgggtgcgtgtg
ttcaaatgtgggccggattttctcgacccgatgatccacgctcgtgccagtggtgcgccg
gtttaccagctcgacctggccatggtcggcgaggcggagagccggcggttgctgtggcag
gcggctggcgaggctgatctgatcctgatcgaaggggtcatgggcctgttcgacggcaag
ccctcggcggccgacctggcccgccatttcggcgtgccggtactgggagtgatcgacggt
gcagccatggcgcagacctttggcgctctggcccatggcctggccaccttccagcctgat
ctgcccttcgccggcgtactcggtaatcgcgtcgccagcacgcgtcatggcgatatcctg
cgtgatgcactgccgcccagcatccgctggttcggcgccttgccgcgcagtgcctccgtg
gagttgcccagtcggcacctgggcctggtgcaagcggctgagttggctgatctggatggg
cgcctggatgctgcggccgatgcgctggcggctaccgccgacgtcgacctaccgccggcg
gtgagttttgccgcgccagtgattgagccgctacctgagctgctggctggagttcgtatc
ggcgtggcgcgtgatgccgcgttcgccttcctttaccaggccaacctcgatctgctgcag
gcactgggcgcagagctgcgttacttttcgccgctggccgatagcgagctgcccgaggtg
gatagtctttatctgcctggtggttaccccgagttgtacctatccgagctggagagcaat
caggccatggccgatgcgattcgcgtccatcaccaggctggcaaaccgctgctcgccgaa
tgtggcggcatgctctatctgctcgatgagttgcgcgacaagcagggcagcagcgggcgc
atgctcggccttctcagtggcagcgccgcgttgcagccgcgcctgacggctctggccctg
caggaagtgacgctaccggaaggtgagctgcgcggtcatagctatcatcactcgcggctg
gaaagtccgctcgagccagtggcacagggccgctgcccgaacggcaagccggtggccgaa
gcggtgtatcgcctggggcggctcactgccagctacatccacttctacctgccctccaac
ccggaggcggccgccgcgctgttgcgtccatga
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