Pseudomonas mendocina NK-01: MDS_3528
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Entry
MDS_3528 CDS
T01473
Name
(GenBank) 5-methylaminomethyl-2-thiouridine methyltransferase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pmk
Pseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmk03016
]
MDS_3528
Enzymes [BR:
pmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
MDS_3528
Transfer RNA biogenesis [BR:
pmk03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MDS_3528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox
FAD_binding_2
Pyr_redox_2
FAD_binding_3
GIDA
3HCDH_N
HI0933_like
Lycopene_cycl
NAD_binding_9
Shikimate_DH
Pyr_redox_3
AlaDh_PNT_C
FAD_oxidored
TrkA_N
Thi4
PDE6_gamma
ApbA
Motif
Other DBs
NCBI-ProteinID:
AEB59559
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All DBs
Position
3888129..3890090
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AA seq
653 aa
AA seq
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MSDVHNAQLDWDEHGQPLSRSYGDVYFSRANGLEETRHVFLAHNQIIERCQALPAGGRLV
IGETGFGTGLNFLCAWQAFSEHAPHDARLHFVSVEKFPLALADLQRALALWPELAPYAEQ
LLAQYRAIHPGFQRLLLDGGRVALTLMIGDVLDCLPQLDAKVDAWFLDGFAPSKNPEMWT
DTLFAELARLSAPGTTLATFTSAGFVRRGLIAAGFAVVRVKGFGHKREMLAGPFQAQQMQ
RPVPWFARPVLPTGERQAVVIGAGLAGCATAASLAARGWRVTVLERHDDIAREASGNPQG
VLYLKLSAHGTALSRLIVAGFGHTRRLLERLQRGVDWDTCGVLQLAFDAKEAERQSKLAA
AFPNDLLHPLTKDKAEQHAGIGLPAGGLFYPDAGWVHPPALCRQLVQHPLIELRPYQEAL
SLSRRDDRWRVEGHNGVLAEAPVLVLACAAEIGRLLSDANLPLKRIRGQISRLPVSKSSS
ALRTVVCAEGYVAPPREGEHTLGASFDFHNDDLTPSVAEHAGNLELLREISTDLAERLDV
QTLDPATLQGRAAFRCTSPDYLPLVGPLAEQQAFNEAYAVLTKDARQVPETPCPWLDGLY
INSGHGSRGLITAPLSGELIAAWLEGEPLPVPRDVAEASHPNRFMLRKLIRGS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtccacaacgcccagctcgactgggacgagcacggccagccgctgtcgcgc
agctatggcgacgtgtacttctcccgcgccaacggcctggaggaaacccgtcacgtcttc
ctcgcccacaaccagatcatcgagcgctgccaagctctcccggcgggcggacgactggtg
atcggcgaaaccggcttcggcaccgggctcaacttcctctgcgcctggcaggccttctcc
gagcatgccccgcatgacgcgcggctgcatttcgtcagcgtggagaaattcccgttggcc
ctggcggatctgcaacgagccctggccctgtggccggagctggcgccctacgccgaacaa
ctgctggcgcagtaccgcgccatccatcccggtttccagcgtctgctgctcgacggcgga
cgcgtggcgctgacgttgatgatcggcgacgtgctcgactgcctgccgcagctggacgcc
aaggtcgatgcctggttcctcgatggcttcgccccgtcgaagaacccggagatgtggaca
gacaccctgttcgccgaactggcgcggctgtcggcgcccggcaccaccctggctaccttc
accagtgccggtttcgtccggcgcgggctgatcgcggcgggcttcgccgtggtgcgggtc
aagggcttcggccacaaacgcgagatgctggctggcccgttccaggcgcagcagatgcag
cgcccggtgccctggttcgcccgcccggtattgccgaccggcgaacgccaggccgtggtg
atcggcgcaggcctggccggttgtgccacggctgccagcctggccgcacgcggctggcgc
gtcactgtgctggagcgccacgacgatatcgcccgcgaggcctcgggcaacccgcaaggc
gtgctttacctgaaactctcagcccacggcaccgcgctgtcgcggctgatcgtcgccggt
ttcggccatacccgccgcctgctcgagcgcctgcaacgtggcgtcgattgggatacctgc
ggcgtgctgcaactggccttcgacgccaaggaggccgaacgtcagagcaagctggctgcg
gccttcccgaatgatctgctgcacccgttgaccaaggataaagccgagcaacacgccggc
atcggcctgccggccggtggcctgttctacccggatgccggctgggtgcacccgccagcg
ctgtgccggcaactggtgcaacacccgctgatcgagctgcgcccatatcaggaggcgctg
agcctgagtcggcgggatgatcgctggcgcgtcgagggccacaacggcgtgctggccgag
gcgccggttctggtattggcctgcgccgccgagatcggtcgcctactgtccgatgccaac
ctgccgctcaagcgtattcgcgggcagatcagccgcctacccgtcagcaagtccagcagt
gcactgcgtaccgtggtctgtgccgagggctatgtcgcaccaccacgtgaaggcgaacac
accctgggcgccagcttcgactttcacaacgatgatctgacgcccagcgtcgccgagcac
gctggcaacctcgaactgctaagggagatttctacggatctcgccgagcgcctggatgtg
cagacgctcgaccctgccactctgcaaggccgcgcagcgttccgctgcaccagcccggac
tacctgccattggtaggcccgctggccgagcagcaggccttcaacgaggcctacgcggtg
ctgaccaaggacgcccgccaggtgccggaaacgccctgcccctggctggatggcctgtac
atcaacagcggccacggctcacgcggtttgatcaccgcgccattgtcgggcgaactgatc
gccgcctggctggaaggtgagccgctaccagtgccacgcgacgtggccgaggccagccac
cccaatcgctttatgctgcgcaagctgattcgcgggagctga
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