Pseudomonas mendocina NK-01: MDS_4464
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Entry
MDS_4464 CDS
T01473
Name
(GenBank) thiamine biosynthesis protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00730
Thiamine metabolism
pmk01100
Metabolic pathways
pmk01240
Biosynthesis of cofactors
pmk04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MDS_4464
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
MDS_4464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmk03016
]
MDS_4464
Enzymes [BR:
pmk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
MDS_4464
Transfer RNA biogenesis [BR:
pmk03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MDS_4464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
YlxR
Motif
Other DBs
NCBI-ProteinID:
AEB60495
LinkDB
All DBs
Position
complement(4898653..4900107)
Genome browser
AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRKQFIRQLGKNIRSVLRDLDPALRVTGVWDNLEVETDLDDPK
LLAEMTERLRNTPGIGLFLEVNEYPLGDLDEITEHCKRHYADQLPGKIFAVRCKRGGKHA
FSSIDVERHVGSRLRQECGAAGIDLKKPEVEVRMEIRDQRLFVVHNRHEGLGGYPLGSLE
QTLVLMSGGFDSTVAAYQMMRRGLVSHFCFFNLGGRAHELGVMEVAHYIWQKFGRSQRVL
FISVPFEEVVGEILGKVDNSQMGVILKRMMLRAATRVAEKLQIEALVTGEAISQVSSQTL
TNLAVIDSATDMLVMRPLIASHKQDIIDTATQIGTAEFAKNMPEYCGVISVNPTTKARGY
RVEKEEAQFDMAILERALERATQLPIDRVIDELGKDVQVEEVREALAGQIVIDIRHPDAA
EDEPLDVPGVEVQALPFYALNNKFKELDENRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatcgtcaaagttttcccggaaatcaccatcaagagccgcccggtgcgcaag
cagttcattcgccagttggggaagaacattcgctccgtgctgcgtgatcttgaccctgct
ctgcgggtcacgggtgtctgggacaaccttgaggtcgagaccgacttggacgatcccaag
ctgctggccgagatgaccgaacgcctgcgcaacacgccgggcatcggcctgttcctcgag
gtcaatgaatacccgctgggcgatctggacgagatcaccgaacactgcaagcgccactac
gccgaccagttgccgggcaagatcttcgccgtgcgttgcaagcgtggcggcaagcacgcg
ttcagctccatcgatgtcgaacgccatgtcggttcacgtctgcgtcaggagtgcggtgca
gccggtatcgacctgaagaaaccggaagtcgaagtgcgcatggaaattcgcgaccagcgc
ctcttcgtggtgcacaatcgccacgaaggcctgggcggttatccgctgggctcgctggag
cagaccctggtgctgatgagcggcggcttcgactccaccgtcgcggcgtaccagatgatg
cgtcgcggcctggtcagccacttctgtttcttcaatctcggtggccgtgcccatgagctg
ggtgtaatggaagtggcgcattacatctggcagaagttcggccgttcgcagcgcgtgctg
ttcatcagcgtgccgttcgaggaagtggtcggcgagattctcggcaaggtcgacaacagc
cagatgggcgtcatcctcaaacgcatgatgctgcgcgcggctacgcgggtcgccgagaaa
ctgcagatcgaggcgctggtcaccggtgaggcgatcagccaggtgtcgagccagaccctg
accaacctggcggtgatcgattcggccaccgacatgctggtgatgcgcccgctgatcgcc
agccacaagcaggacatcatcgacaccgccacgcagatcggcaccgccgagtttgccaag
aacatgcccgaatactgcggcgtgatctcggtcaacccgaccaccaaggcccgcggttac
cgcgtggagaaggaggaggcccagttcgacatggccatcctcgaacgcgccctggaacgc
gcgactcaactgcccatcgaccgcgtgatcgacgaactgggcaaggacgtgcaggtggag
gaagtgcgtgaagcgctggccgggcagatcgtcatcgacatccgccaccccgacgccgcc
gaagacgagccgctcgacgtgccgggtgtcgaggtgcaggcgctgccgttctacgcgctg
aacaacaaattcaaggaactggatgagaaccgccagtacctgctgtattgcgacaagggt
gtcatgagccgcctgcatgcccatcacctgctgagcgaggggcatgccaatgtgcgcgtt
tatcgtccgacataa
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