Pseudomonas mendocina NK-01: MDS_4878
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Entry
MDS_4878 CDS
T01473
Name
(GenBank) L-serine ammonia-lyase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00260
Glycine, serine and threonine metabolism
pmk00270
Cysteine and methionine metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01200
Carbon metabolism
pmk01230
Biosynthesis of amino acids
Module
pmk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MDS_4878
00270 Cysteine and methionine metabolism
MDS_4878
Enzymes [BR:
pmk01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
MDS_4878
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Motif
Pfam:
SDH_alpha
SDH_beta
Motif
Other DBs
NCBI-ProteinID:
AEB60909
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Position
5339518..5340906
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AA seq
462 aa
AA seq
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MAISVFDLFKVGIGPSSSHTVGPMRAAALFTHALENHDHMPKVARVVAELYGSLGATGKG
HGSDKAVLLGLSGHEPDTVNVDQVPEYIETIRRDKRIVLAGKHAVPFDEKADLKMFRKAL
PLHANGLRFAAFDAAGIQLHEATYYSVGGGFVVSEAVLADGSKQKIIAPDATSLPLPFRS
GADLLKLTREHGIGIAEVMRRNERHWRTDEETDAGLLNIWKVMQACVDRGCRTEGILAGG
FKVRRRAAILARKLGGFQRSYIEDPLRMLDWVNLWALAVNEENAAGGRVVTAPTNGAAGI
VPAVLHYYANAISGANERGIIDFLLTAGAIGILYKENASISGAEVGCQGEVGVACSMAAG
ALCAVLGGTPEQVENAAEIGMEHHLGLTCDPVGGLVQIPCIERNAIASVKAINAARMALY
GDGAHYVSLDKVIKTMRETGADMLTKYKETARGGLAVNIIEC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctatcagcgttttcgacctgttcaaagttggtatcggcccgtccagctcccacacc
gtcggcccgatgcgcgccgccgcgctgttcacccacgccctggaaaatcacgaccatatg
cccaaggtggcccgagtggtcgccgagctgtacggctcgctgggcgccaccggcaaaggt
catggcagtgacaaggcggtactgctcggtctcagcggccatgagccggataccgtcaac
gtcgatcaggttcccgagtacatcgaaaccatccgtcgcgacaagcgcatcgtcctggcc
ggcaagcatgccgttcccttcgacgagaaagccgacctgaaaatgttccgcaaggcgctg
ccgctgcacgccaacggcctgcgcttcgccgccttcgatgccgccggcatccagttgcac
gaggccacctactactcggtcggcggcggcttcgtggtcagcgaggcggtactggccgat
ggcagcaagcagaagatcatcgccccggacgccacctccctgccgctgccatttcgcagc
ggcgccgatctgctcaagctgacccgcgagcacggtatcggcatcgccgaggttatgcgc
cgcaacgagcgccactggcgcactgacgaagaaaccgacgccggtctgctgaacatctgg
aaggtgatgcaggcctgcgtggatcgtggctgccgtaccgagggcatcctcgccggtggc
ttcaaggtacgccgccgcgccgcgatcctggcgcgcaagctgggcggcttccagcgcagc
tacatcgaagacccgctgcgcatgctcgactgggtcaacctctgggcgctggcggtgaac
gaggagaacgccgccggcggccgcgtggtcaccgcaccgaccaacggcgccgccggcatc
gtcccggcggtgctgcactactacgccaatgccatctccggcgccaacgagcgcggcatc
atcgacttcctgctgaccgccggggccatcggcatcctgtacaaggaaaacgcctcgatc
agcggtgccgaggtgggttgccagggtgaggtgggcgtggcctgctcgatggctgccggc
gcgctgtgcgcggtactgggcggcaccccggagcaggtcgagaacgccgccgagatcggc
atggagcaccacctgggtctgacctgcgacccggttggcggcctggtgcagatcccctgc
atcgagcgcaacgccatcgcctcggtgaaggccatcaacgccgcacgcatggcgctgtac
ggcgacggcgcgcactacgtgagcctggacaaggtgatcaagaccatgcgcgagaccggt
gccgacatgctgaccaagtacaaggaaaccgcgcgcggtggcctggcggtgaatatcatc
gagtgctga
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