Candidatus Phytoplasma mali: ATP_00046
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Entry
ATP_00046 CDS
T00729
Symbol
rpoE
Name
(GenBank) Putative DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pml
Candidatus Phytoplasma mali
Pathway
pml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATP_00046 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pml03021
]
ATP_00046 (rpoE)
03400 DNA repair and recombination proteins [BR:
pml03400
]
ATP_00046 (rpoE)
Transcription machinery [BR:
pml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATP_00046 (rpoE)
DNA repair and recombination proteins [BR:
pml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATP_00046 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
CAP18233
UniProt:
B3R069
LinkDB
All DBs
Position
59697..60044
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AA seq
115 aa
AA seq
DB search
MKILKHKNHLELAEEILKKNKFSMTINDLINQICVINKIDSKDYEKISQLYLDITLSSKF
IFCGEELWTLKENNLKLWDKDCFFNDKKDIIEEENIDSKDYFYNDDNDDSSEKKK
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaaaacacaaaaatcatttagaacttgccgaagaaattttaaaaaaaaat
aaattttcaatgactattaatgatttaataaatcaaatttgtgtgattaataaaatagat
tcaaaagattatgaaaaaatttctcaattatatttagatattactttaagttcgaaattt
attttttgcggagaagaactttggactttaaaagaaaataatttaaaattatgggataaa
gattgtttttttaatgataaaaaagatataattgaagaagaaaatattgatagtaaagat
tatttttataatgatgataatgatgatagtagcgaaaagaaaaaataa
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