Passer montanus (Eurasian tree sparrow): 120506474
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Entry
120506474 CDS
T07277
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120506474 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pmoa04090
]
120506474 (VCAM1)
04091 Lectins [BR:
pmoa04091
]
120506474 (VCAM1)
CD molecules [BR:
pmoa04090
]
Proteins
120506474 (VCAM1)
Lectins [BR:
pmoa04091
]
I-type lectins (Siglecs)
120506474 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set
C2-set_2
Ig_6
Ig_C17orf99
C1-set
ICAM1_3_5_D2
Ig_4
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
120506474
NCBI-ProteinID:
XP_039574028
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MFKEMGRTSQAVLVILCVLRTVKAFEMEIIPAERIVAQIGGTLVLTCNTTGCASPSFSWR
TQMDSPLGGKVSSHRTYSTLTMNPVSIVNSHSYLCTVICDEGGKKEKSVKVELYSFPSDP
IIEISPSLVAGKPATVTCKIPDVYPSDHLEVLLKKDEHVLHEKYFLEDDSTNTETKTVTY
TFHPTAEDAGKEITCVARLPIADMDFEPKERTSSQKLNANFGPQNTVITASPDSSPMEGD
SLNLTCVTQSNPPAQIVWSKYLAEESIQRLIKNNVLSIPRVHFNDSGRYICEVINLVTNK
TEKATVDIIIQGAPVITKLSIEPSATVQEGENVSIQCSAESNPPPKIILRRKFDNANAGH
YSARSILLPSVMFQNGGDYECVAQNKYGNSKSEITLNVKYGPKNTMITVFPTAALKEGET
VTMKCTSSGNPAPVISWNKKKATGESEKISENATITIRNLKSQDLGLYECEAYNQFGKEE
KAVKLYVQARLEEPDQMIPLIIAFSSVAAVAVPAVAILIYVSRQAKINGSYSLVKALRLK
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagagatgggaagaacaagccaggctgtgctagtaattttgtgtgtgttaaga
actgttaaagcttttgaaatggaaattatacctgctgagagaattgtggcacagattgga
ggcacactcgtactcacatgcaatactactggctgtgcatcaccaagtttttcctggaga
acacagatggacagcccccttggaggaaaagtcagcagccacaggacatattctacattg
actatgaatccagttagcattgtgaattctcattcttatctttgtactgtcatatgtgat
gagggagggaaaaaggagaagagtgtcaaagttgaactttactctttccccagtgatcct
atcattgagatcagcccatccttagttgctggaaaaccagccactgtcacctgtaaaatt
cctgatgtgtatccttctgatcacctggaagttctgctaaagaaagatgaacacgttctt
catgagaaatattttttggaagatgacagcacaaatacagagaccaaaactgtgacatat
acatttcatcccacggctgaagatgctgggaaagagattacctgtgtggccagattacca
attgctgatatggattttgaacccaaagaaagaacatcttctcagaaacttaatgcaaat
tttggtccacaaaatactgtcattactgcatctccagacagctcaccaatggaaggagac
tctctgaacctcacttgtgtgactcagagtaacccaccagcacaaatagtttggagtaaa
tatttggctgaagaaagcattcagcgtctgataaaaaacaatgttctttctattccccgt
gtccatttcaatgattcaggacggtacatctgtgaagtaattaatctggtaactaacaaa
acagagaaagcaactgtggacattattatacaaggtgctccagtcattacaaaactgtca
attgaaccttctgcaacagttcaggaaggagaaaatgtttctatacaatgttctgctgaa
agtaaccctcctcccaagattattttaaggagaaaatttgataatgcaaatgcagggcat
tacagtgccaggagtattcttcttccatctgtgatgttccaaaatggaggagactatgaa
tgtgtagcacaaaataagtatgggaacagtaaaagtgaaatcacgcttaatgtgaaatat
ggaccaaagaatacaatgatcactgttttccctactgctgctcttaaagaaggagaaact
gtaacaatgaaatgtactagttctggtaatccagctcctgtgatctcctggaacaaaaag
aaggccaccggggagtctgagaaaatttcagaaaatgcaactataactatacggaacttg
aaaagccaagatctggggctttatgaatgtgaagcctataatcaatttggcaaggaagaa
aaagctgtgaagttatatgttcaagcaagattggaagaaccagatcagatgataccactg
attattgcattctcatctgtagcagcagtagcagtacctgcagttgcaattttgatctac
gtgtcaagacaagcaaaaatcaatggatcctacagtcttgtaaaagcactcaggttgaaa
gtttga
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