Passer montanus (Eurasian tree sparrow): 120512406
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Entry
120512406 CDS
T07277
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120512406 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
120512406
NCBI-ProteinID:
XP_039586606
LinkDB
All DBs
Position
Unknown
AA seq
2556 aa
AA seq
DB search
MERLLAPGLLVLLLPALTRGLRCSQLAESCLNGGKCETFPNGTEVCQCSGAYVGERCQLP
NPCLSSPCKNAGTCTALVRGSTVDYSCACRLGFTDELCLTPRDNVCLSNPCRNGGTCDLL
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYICRCTAGFHGANCKQDVN
ECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGDTT
YDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFTGAHCEIDIDECDPDPCHYGTCKDSIASFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCICLKGTTGSNCEINLDDCASNPCDYGKCIDKIN
GYECTCEPGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGKCHDGLNGYKCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPCKN
GGECQESEDYKSFSCSCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFS
GRNCDTDIDDCKPNPCHNGGSCSDGIGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCICLPGFTGSYCEH
NINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTSNL
YHCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCKCVAGYRGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCKDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCTPAFTG
PECQYPASSPCTSNPCYNGGTCEFFSDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDI
IPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTKNSQLYPMYVVG
AALVLLAFIGLGVLVNRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRYEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPTLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKP
STKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSGVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHLSINHLNMAGKQDMAMGNSSRMGFDSVPPRLSHLPVSSPS
TGMSSAPMSFSVGSGASLNGQCDWLSRLQNGMVQSQYNPLRGNLQPGAHQQPQNLQHGMM
TSLHNGLPTTSLSQMMSYQAMPSTRLASQPHLMQSQQLQQMQQQQQQQQQLQQPNLQPPQ
QQQQAQQPQQPPQQPQQHHNPSGSSGSSHLGQNFLGTELSQPELQPVSGGAMAVHTILPQ
DSQMLPTSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQ
WSSSSPHSNVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctggcgcccggcctcctggtgctcctgctgcccgccctgacgcgaggt
ttacggtgctcgcagcttgctgaatcctgcctcaacgggggcaagtgtgaaacttttccc
aacgggacggaggtgtgccagtgcagcggtgcctacgtgggcgagcgctgccagctgccc
aacccctgcctgagctccccctgcaagaacgcgggcacctgcacggcgctggtgcgcggc
agcaccgtggattacagctgcgcctgccgcctgggcttcaccgacgagctgtgcctgacg
ccccgcgacaacgtgtgcctcagcaacccctgccgcaacggcggcacctgcgacctgctg
acgctcagcgagtacaagtgccgctgcccgcccggctggtcaggcaaaacctgccagcag
gccgacccctgtgcctccaacccctgtgccaatgggggccagtgcgtgcccttcgaagcc
cactacatctgccgctgcaccgccggcttccacggcgccaactgcaagcaggacgtcaac
gagtgcaacatctcgccgcccgtctgcaagaacgggggcagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagccggcctacaccgggcagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacgggggcacctgccgccagatcggggacaccacc
tacgactgcacctgcctgccagggttcacgggtcagaactgtgaggagaacatcaacgac
tgcccaggcaacaactgcaagaatgggggcacctgcgtggatggcgtcaacacctacaac
tgccagtgcccacctgagtggacaggtcagtactgcactgaggacgtggacgagtgccag
ctgatgcccaacgcctgccagaacggtggcacctgccacaacaaccacggcggctacaac
tgcgtctgtgtcaacggctggacgggcgaggactgcagcgagaacatcgatgactgcgcc
atggccgcctgcttccacggggccacctgccacgaccgcgtggcctccttctactgcgag
tgcccccacggccgcacaggtttgctgtgccacctggatgatgcctgcatcagcaacccc
tgcaacgagggctccaactgcgacaccaaccccgtcaatggcaaggccatctgcacgtgt
ccttcggggtacatggggccagcctgcaaccaggacgtggacgagtgctcgctgggagcc
aacccgtgtgagcacgcagggaagtgcatcaacacccaagggtccttccagtgccagtgt
ctgcagggctactcgggccctcgctgtgagattgatgtcaatgagtgcctctccaacccc
tgccagaatgatgccacctgtctggatcagatcggggagttccagtgcatctgcatgccc
gggtacgagggggtttactgcgagatcaacacggacgagtgcgccagcagcccctgcctg
cacaacggcaactgcctggacaagatcaacgagttccactgcgagtgccccactggcttc
aacgggcacctgtgccagtttgacatcgacgagtgtgccagcaccccctgcaagaacggt
gccaagtgcgtggatggccccaacacctacagctgcgagtgcactgaaggtttcacgggt
gctcactgcgagatcgacatcgatgagtgtgaccctgacccgtgccactacgggacctgc
aaggacagcatcgcctccttcacctgcctctgccagcccggctacacgggccaccgctgc
gacatcaacatcaacgagtgccagagccagccctgcaaaaacgggggcacctgccaggac
aggaacaacgcctacaactgcatctgcctcaaagggaccacgggctccaactgcgagatc
aacctggatgattgtgccagcaacccgtgtgactacggcaagtgcatcgacaagatcaat
ggctacgagtgcacctgcgagccggggtacacagggcgcatgtgcaacatcaacattgac
gagtgtgccagcaacccctgccacaatgggggcacgtgcaaggatggcatcaatggcttc
acctgcctctgccccgagggcttccacgaccccaagtgcctgtctgaagtgaacgagtgc
aacagcaacccctgcatccacgggaaatgccatgatggattgaatggctacaagtgtgac
tgtgaccctggctggagtgggacaaactgtgacattaacaacaatgagtgtgaatccaac
ccctgcatgaacggtggcacctgcaaggacatgaccagtggctacatctgcacctgcagg
gagggcttcagcggccccaactgccagaccaatatcaacgaatgtgcttccaacccctgc
ctgaaccagggcacgtgcattgatgatgttgctggctacacctgcaactgcctcctgccc
tacacaggagccacctgtgaggatgtgctggccccctgtgctggcagcccctgcaagaac
ggtggcgagtgccaggagtcagaggactacaagagcttctcctgcagttgcccccctggc
tggcaaggtcagacctgtgagattgacatcaatgagtgtgtgaagagcccctgcaggaac
ggggccacatgccagaacaccaacgggagctaccgctgcgcctgccggaccggcttctcc
ggccgcaactgcgacaccgacatcgacgactgcaagcccaatccatgccacaacggtggc
tcctgctccgatggcattggcacgttcttctgtgagtgcttggctggtttccgtgggccc
aagtgtgaggaggacatcaatgagtgcgccagcaacccctgcaagaacggggccaactgc
accgactgcgtcaacagctacacctgcacctgcccctccggcttcagcggcatccactgt
gagaacaacacccctgactgcacagagagctcctgcttcaacggtggcacgtgtgtggat
ggcatcaacaccttcacctgcatctgcctgcccggcttcacgggcagctactgcgagcac
aacatcaacgagtgtgactccaagccgtgcctgaacgggggcacgtgtcaggacagctac
gggacgtacaagtgcacctgtccccaggggtacaccgggctcaactgccagaacttggtg
cgttggtgtgactcctcaccctgcaaaaatggaggcaagtgctggcagaccagcaacctg
taccactgcgagtgcaacagcggctggacagggctctactgcgatgtccccagcgtgtcc
tgcgaggtggctgctaagcagcaaggtatcgatgtagcacatctctgcaggaactcgggg
ctctgtgttgacactggcaacactcatttctgccgctgccaggccggctacaccggcagc
tactgcgaggagcaggtggatgaatgctcccccaacccctgccagaacggagccacctgc
acagactacctgggaggctactcctgcaagtgtgtggctggttatcgtggagttaactgc
tcagaggagatcaatgaatgcttgtcccacccatgccagaatggaggaacttgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaac
aatggcaagtgcaaggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagatgtcaacgagtgcctgtccaacccctgcgacgcccgcggc
acccagaactgcgtgcagcgggtcaacgactacaaatgcgagtgcaggcctggctatgca
ggccgtcgctgtgacaccgtggtggacggctgcaaaggcaaaccctgcaggaatggggga
acctgtgctgttgccagcaacactggccgtggcttcatctgcaagtgccccccgggattc
gtgggtgccacctgcgagaacgactcccgcacgtgtgggaacctgcactgcctgaatggt
ggcacctgcatctccatccacaagagctccaagtgcatgtgcacgccggccttcacgggc
cccgagtgccagtacccggccagcagcccctgcacctccaacccctgctacaacgggggc
acctgcgagttcttcagcgacgcctccccctactaccgctgcaactgccccgccaacttc
aacggcctcaactgccacatcctggacttcgacttccagggtggcatcgggcaggacatc
atcccccccaagatcgaggagaagtgcgagatcgccgtgtgcgcggggtacgccggcaac
aagatctgtgatgggaaatgcaacaaccacgcctgtggctgggacgggggcgactgctcc
ctcaacttcaacgacccctggaagaactgctcccagtccctgcagtgctggaagtacttc
aacgatggcaagtgtgactctcagtgcaataatgctggctgcctctacgatgggtttgac
tgccagaagtacgaggggcagtgcaaccctctgtatgaccagtactgcaaagatcacttc
tcggatggtcactgcgaccagggctgcaacaattttgagtgcgagtgggatggtctggac
tgtgctaacaacatgccagagaagctggcagatggcactctggtggtggtggtcctcatc
acccccgagaacctgaagaacaactccttcaacttcctgcgggagctgagccgtgtgctg
cacaccaacgtggtcttcaagaagaaccccaagggggagtacatgatcttcccatactat
ggcaacgaggaggagctgaagaaacattacatcaagaggtccacagaggactggtcagat
atgtccagtgctgtcatcaacaaggtgaagagcagcctctactccagggctggcaggagg
cagaagagggagctcgatcagatggacatcagaggatccattgtctacttggaaattgat
aaccgccagtgcatccagtcatcttcccagtgcttccagagtgccactgatgtggcagca
ttcctgggagccttggcctcccttggcaacctgaacataccctacaaaatagaagctgtc
aaaagtgaaacagccgagcccacgaagaactcccagctgtatcctatgtacgtggtgggg
gcagcgctggtcctgctcgccttcattgggctgggagtgctggtgaaccgcaagcgccgc
agggagcatggccagctttggttcccagaaggcttcaaagtgacagagtccagcaagaag
aagcggcgggagcccctcggggaggattctgttgggctgaaacccctcaaaaatgcttcg
gacggcacgctgatggatgacaaccagaatgagtggggtgatgaggagaccttggacacc
aagaagttcaggtacgaggagcaggcgatgctgccggacacggatgaccagacggatcac
aggcagtggacacagcagcacctggacgccgctgacctgcgcatttcctccatggccccg
acgcctcctcagggggaaatcgatgctgactgcatggatgtcaacgtcagagggccggac
ggcttcacccccctcatgatcgcctcatgcagcggcggagggctggagaccggcaacagc
gaggaggaggacgacgctcccgccgtcatctccgacttcatctaccagggagccagcctg
cacaaccagactgaccgcacgggcgagaccgccctgcacctggccgccaggtactcgcgc
tcggacgctgccaagcgcctgctggaggccagtgctgatgccaacatccaggacaacatg
ggccgcacgccgctccacgccgccgtctccgccgacgcgcagggagtcttccagatcctg
attaggaacagggcgacagacctggatgcccgaatgcatgacgggaccactcccctgatc
ctggctgctcgtttggctgtggaagggatgctggatgacctcatcaactgccacgctgac
gtcaacgccgtggatgatttaggcaagtcagccctgcactgggcagctgctgtgaataat
gtggaagctgcaatggtcctcctgaaaaatggtgccaataaggacatgcagaataataag
gaggagaccccactgttcctggcagccagagaagggagctacgaaaccgccaaggtcctg
ctggaccattttgccaaccgggacatcacggaccacatggaccggctgccgcgggacatc
gcgcaggagcgcatgcaccacgacatcgtgcgcctgctggacgagtacaacctggtgcgg
agccccacgctgcacaacgggcccctgggggcccccaccctgtcccccccgctctgctcc
cccaacagctacatcggcaacctcaaacccgccgtgcagggcaagaaggccaggaagccg
agcaccaaggggctgagctgcaacgggaaggacgccaaagacctcaaagcgcggaggaaa
aagtcgcaggatggaaaggggtgtctgctggacaactccggggtgctgtcgccagtggac
tccctggagtcgccgcacgggtacctctcggacgtggcctctccccctctgatgacctct
ccgttccagcagtccccttccatgcctctgaaccacctgccaggcatgcccgacgcccac
ctgagcatcaaccacctcaacatggcgggcaagcaggatatggccatgggcaactccagc
aggatgggcttcgactcggtgccgccgcgcctgtcccacctgccggtgtccagccccagc
acggggatgagcagtgcccccatgagcttctcggtgggcagcggggccagcctgaacggg
cagtgtgactggctcagccggctgcagaacggcatggtgcagagccagtacaaccccctg
agaggcaacctgcagcccggggcgcaccagcagccccagaacctgcagcacggcatgatg
acctcgctgcacaacgggctgcccaccaccagcttgtcgcagatgatgagctaccaggcc
atgcccagcacccgcctggcatcccagccccacctgatgcagagccagcagctccagcag
atgcagcagcaacagcagcagcagcagcagctgcagcagcccaacctgcagccgccgcag
cagcagcagcaggcgcagcagccccagcagccgccgcagcagccgcagcagcaccacaac
cccagcggctccagcgggagcagccacctgggccagaatttcctcggtacggagctgagc
cagcccgagctgcagccggtgagcggcggcgccatggccgtgcacaccatcctgccgcag
gattcccagatgctgcccacctccctgccctcctcccttgcccagcccatgaccaccacg
cagttcctgacccccccttcccagcacagttattcctcccccttggacaacacccccagc
caccagctccaggtgcccgaccaccctttcctgacgccgtcgccggagtcgccggaccag
tggtccagctcctctcctcactccaatgtgtccgactggtccgagggcatctccagccct
cccacgagtatgcagtcacagatgggacacatccccgaggccttcaagtaa
DBGET
integrated database retrieval system
