Pseudomonas monsensis: HV782_007000
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Entry
HV782_007000 CDS
T07539
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmoe
Pseudomonas monsensis
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmoe03009
]
HV782_007000 (rimO)
Enzymes [BR:
pmoe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HV782_007000 (rimO)
Ribosome biogenesis [BR:
pmoe03009
]
Prokaryotic type
ribosomal protein modification factors
HV782_007000 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QXI01739
LinkDB
All DBs
Position
complement(1620636..1621973)
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AA seq
445 aa
AA seq
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MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVDGAPANDLDLEVVPDDVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccggccaatcccaaggttggcttcgtatctctgggttgcccg
aaagcactggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgacgtg
gtgtccacctatcaggacgccgatgtcgtggtggtcaacacctgcggtttcatcgactcg
gccaaggctgaatcgctggaagtgatcggtgaagcgatcaaggaaaacggcaaggtgatc
gtcaccggttgcatgggcgtggaagaaggcaatatccgcgacgtacacccgagcgtgctg
gccgtgaccggtccgcagcagtacgagcaagtggtcaatgccgtgcacgaagtcgtgccg
ccgcgtcaggatcacaatccgctgatcgacctggtgccgccgcaaggcatcaagctgacg
ccgcgccactacgcctacctgaaaatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaaactggtcagccgtccggtcggcgacgtgctcgacgaa
gcccagcgtctggtcaagtccggcgtcaaagagctgctggtgatctcgcaagacaccagc
gcctacggcgttgatgtgaaataccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactctgtgaagcgctgagcaccctcggcgtctgggtgcgtctgcactac
gtttacccgtacccgcacgttgacgagctgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtgctgaaggcaatgaaacgc
ccggcgttcgaagacaagactctggcgcggatcaagaactggcgcgaaatctgcccggac
ctgattatccgttcgaccttcatcgtcggcttcccgggcgaaaccgaagaagacttccag
tacctgttgaactggctgaccgaagcccagctcgaccgtgtcggctgcttccagtattcg
ccggtagacggcgcacccgccaacgatctggacctggaagtggtcccggacgacgtcaag
caggatcgttgggagcgcttcatggcgcaccagcaagcgatcagctcggcacgcctgcag
atgcgcatcggccgcgagatcgaagtgctggtggacgaagtcgacgagcaaggcgcagtg
ggccgctgcttcttcgacgccccggaaatcgacggcaacgtgttcatcgacaacggcagc
aacctcaagccgggcgacaaggtctggtgcaaagtgactgacgctgacgaatacgatttg
tgggctgagcagatctga
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