Penaeus monodon (black tiger shrimp): 119585911
Help
Entry
119585911 CDS
T08784
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119585911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119585911
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119585911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
ENTH
Motif
Other DBs
NCBI-GeneID:
119585911
NCBI-ProteinID:
XP_037790561
EnsemblRapid:
LOC119585911
LinkDB
All DBs
Position
20:12029398..12045052
Genome browser
AA seq
1282 aa
AA seq
DB search
MAKQATLFTFFSKSSTPNKPKREETTPNKVKLKGNDFKALDLVWAKLDGYPWWPGLVCDS
PSEKTFMRKGQIHVQFFDNPPTRGWVREAFLKPYCPPGENGIPTYKDPKWIRAMGEADGA
KELPVEDRNLLIVEMVPSDEEDEAMETDEDDSDKSKENVDANISGRKGSKTKSKESDGEP
KKKRRRIILHSDSESGDDYKPENDDESEDGSASSGVDENDVSEPESESEIDSPVKAPSNK
RKRPAPGGRNLNSSLASSPSVSKTPSSTPKISQGTKSKLSLFAAKETPAKAEDTTENYDY
MNYPWLKPEGIRDRERRRPDHPDYNPRTLYVPEDFLNQQTPGLRQWWELKSRHYDTVLFF
KMGKFYELFHMDAMIGVQELGLLMMKGEKAHSGFPEIAYGRYSATLIEKGYKVARIEQTE
TPEMMEKRCKNMGRPTKFDRVVKREVCQISTRGTRVYSVLDGEASESSTNYLLAISEKTK
AGAGDVREFGVAFIDTSIGTFHIGQFPDDRHDSRLSTLMAHYPPAQILYERGRLSQKTQK
LVTMSVPANLREALVPEKEFWTASKTLTFLADGTYFKDEEGGSLQWPKEIENMLDESDTL
GKTPSPEWELGLSALGALVWYLMDCRLEEQLLTRKRFETYSPLDEAVSTKQGKERFSSCF
YYQRKVLDGTTLCNLEVFENNSGGFEGTLIDRLDRCSTPFGKRLLRSWLCAPLCSPSSIN
SRLDAIEDLRNNPEVLEEITPQLKGLPDLERILSKIHSQGLKRSKNHPDSRAIFFEDEKY
NKRKVEDFLAALNGFKATIQIMKTFKGIASSLQSDLLKKCVSSTKNGGKFPVLKEALDFF
ENAFDHHEAKREGKIIPSKGVDKEFDEAAEQIQETKASLAEYLKQQCKYFGAKVVYWGND
KKRYQLEVPDHACKKAGNEYELVSQKKGYKRFWTPKTKDLLADMISGEEHHRTALKDIAR
RIFEQFDNHHEKWEAVVQCISVLDVLISLTRYSQEINSVRPAISIPSEELQPFIEIRDGL
HPCVVTTFSGDEFIPNDVVLGGSSEDAHSPLVLVTGPNMGGKSTLMRQTALICILAQLGS
FVPASSCQLTPVDRVFTRLGASDRIMMGESTFFVELAETSSIIQHSTNHSLVLVDELGRG
TATYDGTAIASAVVEALVKLKCRTLFSTHYHSLVDDFADVKNVSLGHMACMVEGENEEDP
SQETITFLYKFTGGACPKSYGFNAARLADLPEEVIRRGSQKARELEKNNMKKRTFTEVFR
GKSIGKVNNLKHSLKKIIDIAA
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacaggcgacgctatttacgttcttttcgaagtctagtactccaaataaaccc
aagcgcgaggagacaacgccgaacaaagtcaaactgaaggggaatgatttcaaggccttg
gacttggtatgggcaaagcttgatggctacccttggtggccaggccttgtgtgtgacagt
cccagtgaaaagaccttcatgcgcaagggccagattcatgtccagttttttgataatcca
cctactcgaggatgggtcagagaagcgtttctgaaaccctactgtccacctggagagaat
ggtattcctacctacaaggatcccaagtggatcagagccatgggggaagcagatggagcc
aaggaactccctgtggaggaccgcaatcttcttattgtggaaatggtaccatctgatgag
gaggatgaggcaatggaaacagatgaggatgatagtgacaagagcaaggagaatgttgat
gccaatattagtgggaggaaaggaagcaaaacgaagagcaaggaatcagatggagaacca
aaaaagaaaagaaggagaattattttacattctgatagtgaatctggagatgattataag
ccagaaaatgatgatgaaagcgaagatggttcagccagctctggtgtggatgaaaatgat
gtatcagaacctgagagtgagtctgagattgattctcctgtaaaggcaccaagtaataaa
cgaaaaagaccggcacctggagggcgtaacctgaattcatctttggcctcatcgccttca
gtatccaagacaccaagcagcacacccaaaatttctcaaggaacaaaatcaaaattgtca
ctctttgctgcaaaagagactccagctaaggcagaggatactacagaaaattatgattac
atgaattatccatggctgaaaccagaaggtataagagatcgtgaaaggcgtcggccagat
cacccagactataacccaagaactctatatgtccctgaagatttcctgaaccaacaaact
ccaggcctgaggcagtggtgggaactcaaatctcgtcattatgatacagtactgttcttc
aagatgggtaaattttatgagctgtttcatatggatgctatgattggagtccaagagctt
ggcttacttatgatgaagggtgaaaaggctcattcaggttttccagaaattgcttatgga
cgatattcagccacattgattgagaaaggttacaaagttgcacgtattgaacaaacagaa
accccagaaatgatggagaaaagatgcaaaaacatgggtcgtccaacaaagtttgaccgt
gttgttaaacgtgaagtatgccagattagcacaagaggaactcgagtttacagtgttttg
gacggagaagcttcagaatcctcaacaaattatcttctggctatttcagaaaagacaaaa
gctggggctggtgatgttcgtgagtttggtgtagccttcattgacaccagcattggaacc
ttccacattggccagtttccagatgatcgccatgattcacggttaagcaccttgatggct
cactatccaccagcccagattctctatgaacgaggacgactgtcacagaagacacaaaaa
cttgttacaatgtcagtgccagccaatttgcgggaggccctggtgcctgagaaagaattt
tggacagctagcaaaacactgactttcttagctgatggcacatatttcaaggatgaggag
ggaggatctttgcagtggcctaaagagattgagaatatgttagatgagagtgatacccta
ggaaaaactccatctccagaatgggaacttgggctgtctgccttaggtgctcttgtttgg
tacctgatggactgtcgcctagaggagcagttgcttactaggaaaaggtttgaaacctac
agtcccctagatgaagcagtatcaaccaaacaagggaaagaaagattcagttcctgcttt
tattatcagagaaaagtcctggatggcacaaccctgtgtaacttggaagtgtttgagaat
aacagtggtggctttgaaggaaccctcattgacagacttgatagatgctccacaccattc
ggcaaaagattactacgcagctggttgtgtgctcctttgtgtagtccctctagcataaat
agtcgtctggatgccattgaagacttgcgaaataacccagaagttttagaagaaataaca
ccacagttaaagggcttgcctgatctggagagaattttatccaaaatacactcccaaggt
ctgaaacgtagcaagaatcatccagatagccgggcaattttctttgaagacgaaaaatac
aacaagagaaaggtggaagacttccttgctgctcttaatggatttaaagcaactatacaa
atcatgaagacttttaaagggattgcaagctctctgcagtcagacctactgaagaaatgt
gtcagtagtacgaaaaatggtggaaaattccctgtgctcaaagaagctttggatttcttt
gaaaatgcatttgatcatcatgaagccaaacgggaaggaaagattatcccaagtaaaggt
gttgataaagaatttgatgaagcagcagaacaaatacaagaaactaaagctagtttagca
gaatatctcaaacagcagtgtaaatattttggtgcaaaggttgtttattggggcaatgac
aaaaagagataccagcttgaagtcccagatcatgcttgtaagaaggctggcaatgaatat
gaactagttagtcagaagaaaggatacaaacgattctggactcccaagacaaaagacttg
ctggcagacatgatctcaggtgaagaacaccatagaacagcattgaaggatattgcacgc
agaatcttcgagcagtttgataaccatcatgagaaatgggaagcagtggtccagtgtata
tcagttttggatgtactcatttctctcactcgatattctcaagagatcaatagtgtcagg
ccagccatttctatacccagtgaagaactacaaccattcattgagattcgagatggtctt
cacccttgtgttgtaactaccttcagtggagatgaatttattcctaatgatgtggtactt
ggtggaagcagtgaagatgctcactccccattagtcctggtaacaggtcctaacatgggt
ggtaaatcaacactcatgagacagactgccctcatatgcatccttgctcaattgggttca
tttgtaccagcaagttcttgccagttaacccctgttgaccgagtatttacaagacttggt
gcctcagatagaatcatgatgggagaatccactttctttgttgaacttgctgaaacatcc
tccataattcagcattctacaaatcattcactggttttggtggatgaacttggtcgaggt
acagcaacatatgatggaacagccattgcttcagcagttgtagaagctcttgtgaagtta
aaatgtcgtacactcttctcaactcactatcattctttagttgatgactttgctgatgtg
aagaatgtctcattagggcatatggcttgtatggttgaaggagagaatgaagaagatcca
tctcaggaaactataactttcctgtacaagtttacaggaggtgcatgtcctaagtcctat
ggatttaatgcagcccgacttgctgatctgccagaggaagttatacgccgtggaagtcag
aaggctcgggaacttgagaagaataacatgaagaaacgaacatttacagaagtgtttaga
ggaaagagtataggaaaagttaataatcttaagcattccctaaagaaaattattgacatt
gctgcctga
DBGET
integrated database retrieval system
