Petromyzon marinus (sea lamprey): 116939772
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Entry
116939772 CDS
T09614
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116939772 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116939772 (POLR1B)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116939772 (POLR1B)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116939772 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
116939772
NCBI-ProteinID:
XP_032804453
EnsemblRapid:
ENSPMAG00000044493
LinkDB
All DBs
Position
6:complement(14233326..14249792)
Genome browser
AA seq
1151 aa
AA seq
DB search
MAASTEPPPVACGAPCLKELTAPDYGRPPAAQRRALQELVKAHVESFDYVLHEGLSQAVQ
AIPPIEFMVNGNRLSLAFADTSISPPMVGKAAVCRDMRVFPAECRARRATYRGKLMADVS
WSVNGEPQGIIQQSLGQVPIMVKSKTCNLRGMSPAELIAHHEEAEEMGGYYIINGIEKVV
RMLIMPRRNYPIALNRPKWKSRGPGYTEFGLSIHCVCEEHTAINMNLHYLDNGTVMLNFI
YRKQLFFMPLGFALKGLVSFTDYRIFSELTKGMEGNSFYRSCVAYMMRSVGDEGCLTQAQ
VMRYLGERFRVKLLLPEWLTDEEVAEFLFDQCICIHLKNNVEKFQLLCMMTRKLFAFAKG
ECAPENPDSLSTQEVLTSGHLYLMMLKEKMEGWLMGAKFSFDKRVQRHGNIPLTMDSIAK
VLTSVSDLTRATEYLLATGNLASKTGLGMLQDSGLAVVADKLNFTRYISHFRAVHRGAAF
ARMRTTTVRRLLPESWGFLCPVHTPDGTPCGLLNHLTVGAQVVTAVMPTGGLPALLCSLG
VVPVDGTPACPYSECYPVMLDGSFVGWADPRIAPEIVSTLRTYKARKEKRVPPWTEVVLV
PKTTCASLYPALYVFTGAGRLIRPVRNLALGTEELIGTFEQIYMDIAIRENEIVKGVTTH
QELFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGTPLHNFRDRSDNKLYRLQTPQ
SPLVRPYMYDHYAMDTYPAGTNAVVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTEL
VDLTKCVREGRDELVFGFKAGDDARPGAARLDADGLPSIGSWLRYGEPFYSYVNLATGEA
TVIAYKGKEDAVVDNVKACGNDSGTGRFYRACITMRIPRNPTIGDKFASRHGQKGILSRL
WRTEDMPFSEGGMTPDILFNPHGFPSRMTIGMLIESMAGKSAAMHGLCHDATPFTFSERS
STDGDEGKKLTAVEYFGKLLSAAGYSHLGTERLYSGISGLELDADIFIGIVYYQRLRHMV
SDKFQVRTTGARDRLTCQPVGGRNVQGGVRFGEMERDALLAHGTSFLLHDRLVACSDRCE
ARVCTRCGSLLSPTLERPPPDWAHTRSGRRAWACVVCKSADDVCVVTMPFVLRYFVAELA
SMNIKVKLQVK
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtccaccgagccgccgccggttgcctgcggcgctccgtgcctcaaggagctc
acggcgcccgactacgggcggccgcctgccgcgcagaggcgcgccctgcaggagctcgtc
aaggcccacgtcgagtcgttcgactacgtcctgcacgagggtctctcgcaggcggtgcag
gccatcccgcccatcgagttcatggtaaatggcaatcgcctgtcgctggctttcgccgac
acctccatctctccgcccatggtgggcaaggcagccgtgtgccgggacatgcgcgtcttc
cccgccgagtgccgtgcgcgccgcgccacctaccgcggcaagctcatggcggatgtgagc
tggtcggtgaatggggagccgcagggcatcatccagcagagtctgggtcaagtgcccatc
atggtgaagtccaagacttgcaacctgcgcgggatgtcgcccgccgagctcatagctcac
cacgaggaggccgaggaaatgggcggctactacattatcaacggcatcgagaaggtggtg
cgcatgctgatcatgccacggcggaactaccctattgccttgaaccggcccaagtggaag
agcaggggcccgggctacaccgagttcggcctctccattcactgtgtgtgcgaggagcac
acggccatcaacatgaatctgcactacctggacaacggcaccgtcatgctcaatttcatc
tatcgcaagcagctcttcttcatgccgctcggcttcgcgctcaagggcctcgtgtccttc
acagactaccgcatcttcagcgagctcacaaagggcatggaggggaactcgttctaccgg
agctgtgtggcgtacatgatgcgctccgtgggtgacgagggctgcctcacgcaggcccag
gtgatgcgctacctgggagagcgattccgcgtcaagcttctcctgcccgagtggctcacg
gacgaggaggtggcggagttcctcttcgaccagtgtatatgcatccacctcaagaacaac
gtagagaagttccagctgttgtgcatgatgacgcgcaaactcttcgccttcgccaagggg
gagtgtgcgccggagaaccccgacagcctctcaacgcaggaggtcttgacttcggggcat
ctctacctcatgatgctcaaggagaaaatggagggctggctcatgggcgccaagttttcg
tttgacaagcgcgtgcagcgccacggcaacatcccgctcaccatggactccattgccaag
gtcctgacctccgtgtcagacctcacccgcgccaccgagtatctgctggcgacagggaac
ctcgcctccaagacaggcctgggcatgttgcaggattcgggtctggcggtggtggccgac
aagctgaacttcacgcgctacatctcgcacttccgcgccgtgcaccgcggcgccgcgttt
gcgcgtatgcgcacgacgacggtgcgccgcctgcttcccgagtcgtggggcttcttgtgc
cccgtgcacacgcctgacgggacgccctgcggcctcctcaaccacttgacggtcggcgcc
caggtggtgacggccgtcatgcccaccggtggcttgcctgccctgctctgctcgctcggt
gtggtgccggtggacggcacccccgcttgcccctactccgagtgctacccggtgatgctg
gatggctccttcgtgggctgggccgacccccggatcgcgccggagatcgtcagcacgctg
cgcacgtacaaggcgcgcaaggagaagcgggtgccgccgtggaccgaggtggtgctggtg
cccaagacgacctgcgccagcctctacccagcgctctacgtgttcacgggcgcggggcgc
ctcatccgccccgtccgcaacctggcactcggcaccgaggagctcataggcaccttcgag
cagatttacatggacatcgcgatccgtgagaacgagatcgtgaagggggtgaccacgcac
caggagctgttcccacacagcatgctgagcgtggtggccaacttcatcccctactcggac
cacaaccagagcccccgcaacatgtaccagtgtcagatgggcaagcagacgatggggacc
ccgctgcacaacttccgcgaccgctctgacaacaagctgtaccggctgcagacgccacag
agccccctggtgcggccgtacatgtacgaccactatgccatggacacttatcccgcgggc
accaacgccgtggtggcagtcatctcctacacgggatacgacatggaggacgccatgatc
gtgaacaagtcgtcgtgggagcgcggcttcgcgcacggcagcatctacaagacggagctc
gtggatctcaccaagtgcgtgcgcgagggccgcgacgagctcgtgttcggcttcaaggcc
ggcgacgacgcgcgacccggcgccgccaggctcgacgccgatggccttccctcgatcggc
tcgtggctgcgctacggggagcccttctactcctacgtgaacctcgccactggcgaggcg
accgtcatcgcctacaagggcaaggaggacgcggtcgtggacaacgtgaaggcgtgcggc
aacgacagcggcacgggccgcttctatcgggcgtgcatcacgatgcgcattccccgcaac
cccacgatcggcgacaagttcgccagccgccacggccagaagggcatcttgagccggctg
tggcgcaccgaggatatgccgttcagcgagggcggcatgacgcccgacatcctgttcaac
ccgcacgggttcccatcgcgcatgaccatcggcatgctgatagagagcatggccggcaag
tcggccgccatgcacggcctgtgtcacgacgccacgccgttcaccttctcggagaggagc
tcgaccgacggagacgagggtaagaagctgacggcggtggagtattttggcaagctgctg
agtgccgcgggctacagccacctgggcacggagcgcctgtacagcggcatcagcggcctg
gagctcgacgccgacatcttcatcggcatcgtctactaccagcgcctgcgccacatggtg
tccgacaagttccaggtgcgaacgacgggggcgcgcgaccgcctcacctgccagccggtg
ggcgggcgcaacgtacagggcggcgtgcgcttcggcgagatggagcgcgacgcgctgctg
gcgcacggcacctcgttcctgctgcacgaccgcctggtggcgtgctcggaccgctgcgag
gcgcgcgtgtgcacgcgctgcggctcgctgctgtcgcccacgctggagcggccgccgccc
gactgggcgcacacccgcagcggtcgccgcgcctgggcgtgcgtcgtttgcaagagcgcg
gacgacgtgtgcgtcgtgacgatgcccttcgtgctgcgctacttcgtggccgagcttgcc
tctatgaacatcaaagtgaagctgcaggtcaagtga
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