Petromyzon marinus (sea lamprey): 116942008
Help
Entry
116942008 CDS
T09614
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00310
Lysine degradation
pmrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116942008 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116942008 (PRDM6)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116942008 (PRDM6)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
116942008 (PRDM6)
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116942008 (PRDM6)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116942008 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
Zap1_zf1
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
116942008
NCBI-ProteinID:
XP_032809400
EnsemblRapid:
ENSPMAG00000020540
LinkDB
All DBs
Position
13:complement(11061234..11124713)
Genome browser
AA seq
657 aa
AA seq
DB search
MSCATNMAQRGCMELSAIRQEIWPFPAADGSLQGAQDIMKPTASYPSAFLKVDAAYVRHW
QQQLLPHGLPAAQDPGPPRASLDLHLPDVCEPGPLAMGGSEATQEAKAAAAAAAAAAAAA
AAGPTLLQLQLQACKPTLQSCMPGSAAAAAAAAAAVVPMRGGQQVLFDMAGSGQACAGHK
EGPPCVRTAGPFERAFVQASSPFTAEELDYYLYGQQRMEIIPVNNHGDDTSNRCDMCADN
RSGECPMHGPLHSLRRLVGTSAPPASASSSLRPEPPASVRASLPRELCLSGSGLPGAGLG
LCAAQRLPAGTWLGPYDGARVPVERLRAGAVRNTRHLWEVYDSDGCLLHFLDGSEPGRSS
WMRYIRCARHRAEQNLSVLQHKSCIFYRACADIPRGSELLVWYDESYASFLGIPLQHVAQ
DDTANVPLSAAEAVSRHEALSPLGKAGKLPPPAVHWPSQALPAAGRSYPQGDRPGAAYSY
GCNGSASVGGSPGSGMGLGGLGGGAGGGGLGGHKVLASPTSTSQLGGEFSDWHLWKCGQC
FKTFTQRILLQMHVCSQNPDRPYQCGHCAQSFSQPSELRNHVVTHSSDRPFKCGYCGRAF
AGATTLNNHIRTHTGEKPFKCERCEQSFTQATQLSRHQRTPNECKGPADCGESIEVD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcgcgaccaacatggcacagagaggctgcatggagctgagcgccatccgccag
gagatctggcccttcccggcggccgacgggtccctgcaaggcgcgcaggatatcatgaag
cccacggccagctacccctcggccttcctcaaggtggacgctgcctacgtgcgtcactgg
cagcagcagctccttccacacggcctcccggcggcacaggacccgggaccaccccgcgcc
tctctcgacctgcacctcccagacgtatgcgagcctggccctctggccatgggcggcagc
gaggccacgcaggaggcaaaggcggcagcagcagcggcggcagcggcggccgcagccgcg
gcagcagggcccactctgctgcagctccagttgcaagcttgcaagccgaccctgcagtcg
tgcatgcccggctccgccgcagcagcagcagcagcagcagccgccgtcgtgccaatgcgt
ggaggacagcaggtgctgtttgacatggccgggtcggggcaagcgtgcgccggccacaag
gagggcccaccgtgcgtgcggactgcggggcccttcgagagggccttcgtgcaggccagc
agcccgttcacggcggaggagctagactactacctgtacgggcagcagcgcatggagatc
atccccgtgaataaccacggcgacgacaccagcaaccgttgcgacatgtgtgccgacaat
cgcagtggcgagtgccccatgcacggccccctgcactcgctccgtcgcttggtcggcacc
agcgccccgccggcatcggcctcatcctccctgcgccccgagccgccggcgtccgtgcgc
gcctcgctgccccgcgagctctgcctgtccggcagcgggctgcccggcgccgggctcggc
ctctgcgctgcccagcggctgcccgcgggcacctggctgggcccctacgacggagcgcgg
gtgcccgtggagaggctgcgggcgggagcggtgcgcaacacccgccacctctgggaggta
tacgacagcgacgggtgcctgctgcacttcctggatggcagcgagcccgggcggagcagc
tggatgcgctacatccgctgcgcacgccaccgtgccgagcagaatctctccgtcctgcag
cacaagtcgtgcatattttaccgggcatgcgccgacatccctcggggctcggagctgctg
gtgtggtacgacgagtcgtacgcctctttcctggggatccctctgcagcacgtggcacag
gacgacaccgcaaacgtgcccctgtctgccgcggaagccgtgtcgcggcacgaggccctg
tcgcccctgggcaaggcgggcaagcttccgccccccgcggtgcactggccgagccaggcc
ctgccggccgccgggaggtcgtacccgcagggcgacaggcccggggcggcctacagctac
ggctgcaatggcagcgccagcgtggggggcagccccggctccggcatgggcttgggcggg
ctcggcggtggcgcagggggcggtgggctcggcggtcacaaggtgctggcgagtcccacg
tccaccagccagctgggtggggagttcagtgattggcacctgtggaagtgtggccaatgc
ttcaagaccttcacgcagcgaatcctgctgcagatgcacgtgtgttcgcagaacccggac
aggccctaccagtgtggccactgcgcccagtccttctcccagccctcggagctgcggaat
cacgtggtcacccactcgagtgaccgtccgttcaaatgcggctactgcgggcgcgccttc
gccggagccaccacactcaacaaccacatccgcacgcacacgggcgagaagcccttcaag
tgcgaacggtgcgagcagagcttcacgcaggccacgcagctgagccgccaccagcgcacg
cccaacgaatgcaagggtccggccgactgcggagaatcgatcgaggtggattga
DBGET
integrated database retrieval system
