Petromyzon marinus (sea lamprey): 116942393
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Entry
116942393 CDS
T09614
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04510
Focal adhesion
pmrn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116942393
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116942393
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
116942393
NCBI-ProteinID:
XP_032810153
EnsemblRapid:
ENSPMAG00000005955
LinkDB
All DBs
Position
14:10219704..10290404
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AA seq
1789 aa
AA seq
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MNEDQAMLYRVVLLCVALGASVASQEAWGAAHGCAHGSCYPVTGDLLVGRADKISASSTC
GLVARQRYCIVSHLQEQEKCFHCDSRRPYQPGRNPNSHRIENVVTSFAPSRRMTWWQAEN
GVEKVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSSNFGRSWKPYRYFAYDCDAAFPG
IATRTLQRVDDVVCESRYSDIEPSTEGEVIFKVLDPAIKITDPYSHTIQDLLKITNLRIN
LTRLHTLGDNLLDSRSEIKQKYYYSLYELVVRGSCFCYGHASECAPIAPTQRDHDGMVHG
RCVCKHRTRGLNCEQCEDFYADSPWRPAEGRQSHECKKCNCNNHSDKCHFDVAVYKASGN
VSGGVCEDCRHNTMGRNCELCNTFFYRDPRRDAGDADACLQCDCEPDGTLNGGLCDGHTD
AALGLRAGQCRCKPNAEGPRCDRCKAGFFGLSGDDPLGCRPCQCNPLGTLPGRAACDAST
GDCFCKRLVTGRRCDQCLPGHWGLGHNLSGCRVCECDDGGAIDNKCSMSTGQCRCRSHMT
GRTCGQVEPGYFVAALDYHTYEAEEATRSPGVTAVVREPPRDRAAASWTGRGMCRVPEGG
HLDFSVSVPFSMEYDLVLRYEPQLPEEWEEVVVTVERPGAIVASSTCGNTIPSDDLVSVT
LPPGSRHVVVPQPMCLEKGLGYGVRVDFKSYRSGGSVANAHVLVDSLVLLPRHSSLEMFI
AGDPASTARRTSFERYRCGDAGGAVSKAPVTDVCAGLLRSMSALVHNGSLPCQCNTQGSS
STECNPVGGQCRCKPNVAGRRCDQCSPGSFGFGPSGCRECHCDQRGSTSAICDAVSGQCA
CRPGAFGRQCDRCEAGHWGFPECRACRCHGHSDECNPRTGACLSCRGHTAGDSCDRCASG
YYGSPGAGEQCRPCQCPEGPGTGRHFASGCSHDPRSRAVACACLPGFTGARCDQCSPGHY
GDLRVAGGRCQPCQCNGNIDPTDAASCDGRTGRCLRCLRDTEGSACQNCRPGYYGDATSQ
RRCQKCTCVTAGTERSSCGLADGACACDPRSGQCRCLPNVQGLACDRCTPNHWGLSQGTG
CRPCGCDPAHSAGPSCSEFNGQCHCLPGFGGLTCSECQENHWGEPRVKCSACDCESSGVL
TQQCQRATGQCACRPGVAGRRCDRCARGFSGAFPACEPCHEPCFPDWEAAISELGRRAGG
LSERATRLLTGGADAGPYARRMAEVEENLAGARELLAVRNASAAAVERLSGLIDDVGRQV
EAMTGRLAQLEAGIGGAAKQNGDANVLLSELDRDAREASTRASELGYQIDTIKHSNFRGA
YGSVKDSYQQSREAERKASGAATNPAGPVARSEATRQRAEKFMAAKRAELEQRLDANADA
LQELGWEARQLELNELNEKVCGVTRDVPCAESACGGVGCRDEDGRPHCGGMNCGGVATVA
SNALERSTIADREIQKALGDLDKLHQQVMDVKSKAGKAKEEAQGTLQRANGTRAQVEGAV
QGLRELIKQIKEFLTEEGASPDSIELVAERVLRLGVPASPQQIGRLADEIKERVSSLANV
DAILARTAGSINEAERLLQDAKRAKARAENAKSAAETVRKALAGAREAQAGAEVAIQQAR
SDLHDTQDTLASTESETAAAGQRLQDATARLLSLERDVDALKMKTAANSLAAGKADKAAG
MAKQRADEAKQMHDGELRDRFRALQDLFGKKGRGAEEARRRVEQLREQARAVLAGAQARL
ARLAELEVAYDGNAVELERKAHRLRGLEDKLRGIVYAINKQINVYNTCQ
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaccaggcaatgctctacagagtcgtgctgctgtgcgtggcgctgggcgcc
tccgtggcctcgcaggaggcgtggggcgcggcgcacggatgcgcccacggcagctgctac
cccgtgacgggagacctcctcgtcggcagggcggacaagatctccgcttcctccacgtgc
ggcctcgtcgcgcgccagcgatactgcatcgtgagccacctgcaggagcaggagaagtgc
ttccactgcgactcgcggcggccgtaccaaccggggcgcaaccccaacagccaccgcatc
gaaaacgtcgtgacgtccttcgcgcccagccgacgcatgacctggtggcaggcggaaaac
ggcgttgagaaggtcaccatacagctggacctggaggcagagtttcacttcactcatctc
atcatgaccttcaagacgttcaggccggccgccatgctggtggagcgctcgtcgaacttc
ggccgttcgtggaagccgtaccgctactttgcgtacgactgcgacgcggcgttcccgggc
atcgcgacgcgaaccctgcagcgcgtggacgacgtggtgtgcgagtcgcgctactccgac
atcgagccgtccaccgagggcgaggtcatctttaaagtcctggaccctgccataaagatc
accgatccctacagccacacgatacaagacctgctgaagatcacgaacctgcgcatcaac
ctgacgcggctgcacacgctgggcgacaacctgctggactcgcgctccgagatcaagcag
aagtactactactcgctctacgagctggtggtgcgcggatcctgcttctgctacggccac
gccagcgagtgcgcgcccatcgcgcccacgcagcgcgaccacgacggcatggttcatggg
aggtgcgtgtgcaagcatcgcacgcgggggctcaactgcgagcagtgcgaggatttctac
gccgactcgccctggaggccggccgagggacggcagtctcacgagtgcaaaaagtgcaac
tgcaacaaccactcggacaagtgccacttcgacgtggccgtgtacaaggcgtcgggcaac
gtgagcggcggggtgtgcgaggactgccgccacaacaccatggggcgcaactgcgagctc
tgcaacaccttcttctaccgcgacccgcgccgggacgccggcgacgccgacgcctgcttg
cagtgcgactgcgagcccgacgggacgctcaacggggggctctgcgacggccacacggac
gccgcgctgggcctgcgtgccggccagtgccgctgcaagcccaacgcggagggcccgcgc
tgcgaccgctgcaaggcgggattcttcggcctcagcggcgacgacccgctcggctgccgc
ccgtgccagtgcaaccccctggggacgctgccgggccgggccgcgtgcgacgcctccacc
ggggactgcttctgcaagcgcctcgtgactgggcggcgctgcgaccagtgtctgcccgga
cactggggcctgggccacaacctgagtgggtgcagggtgtgcgagtgcgatgacggagga
gccatcgacaacaagtgttcgatgagcaccgggcagtgccgctgccgaagtcacatgacc
ggacgcacgtgcgggcaggtggagcccgggtattttgtggcggcgctcgattaccacacg
tacgaggcggaggaggccacgcgctcgccgggcgtgacggcggtggtgcgggagcctccg
cgcgaccgcgccgcggcgagctggacgggacgggggatgtgccgtgtgcccgagggcggc
cacctcgacttcagcgtctccgtgcccttctccatggagtacgacctggtgctgcgctac
gaaccgcagctgcccgaggagtgggaggaggtggtggtcaccgtggagcgaccgggtgcc
attgtggcgagcagcacctgcggcaacaccatcccatccgacgacctcgtgtccgtcacg
ctgccgcccggctccaggcacgtggtggtgccgcagcccatgtgcctggagaagggcctc
ggctacggcgtccgcgtcgacttcaagagctaccgctccgggggcagcgtcgcaaacgcg
catgtcctcgtcgactcgttggtgctgctgccgcgccactcttcgctggagatgttcatc
gcgggcgacccggcgtcgacggcgcgccgcaccagcttcgagcgctaccgctgcggcgac
gcgggcggggccgtgagcaaggcgcccgtgacggacgtgtgcgcggggctgctgcggagc
atgtcggcgctcgtccacaacggctcgctcccgtgccagtgcaacacgcagggctccagt
agcaccgagtgcaaccccgtgggcgggcagtgccgctgcaaacccaacgtcgccggacgt
cggtgcgaccagtgcagcccggggtccttcggcttcggaccgtcagggtgcagggagtgc
cactgcgaccagcgcggctccaccagcgcgatctgcgacgccgtctcggggcagtgcgcc
tgccggcccggggccttcggccgccagtgcgaccgctgcgaggcgggacactggggcttc
ccggagtgccgcgcctgccgctgccacggacactcggacgagtgcaacccccgcacgggc
gcgtgcctctcgtgccgcggccacacggccggcgatagctgcgacagatgcgccagtggc
tactacgggagccctggcgccggggagcagtgccgcccgtgccagtgccccgagggccca
gggaccggacgccactttgccagcggctgcagccacgacccgcgctcaagggccgtggcg
tgcgcgtgtctccccggcttcaccggcgctcgctgcgaccaatgctccccgggccactac
ggggacctgcgcgtggcgggcggtcgatgccagccgtgccagtgcaacggcaacatcgac
cccacggacgcggcgtcctgcgacggccgcacggggcgctgccttcgctgcctgcgcgac
acggagggatccgcgtgccagaactgtcgccccggatactacggtgacgccacctcgcag
cggcggtgccagaagtgcacgtgcgtcacggctggcacggagcgctccagctgcggcctg
gcggacggggcctgcgcctgtgatccccgcagcgggcagtgccgctgcctgcccaacgtc
cagggcctggcgtgcgaccgctgcacccccaaccactgggggctgagccagggcaccggg
tgccgcccctgcggctgtgaccccgcgcactccgctgggccatcttgcagcgagttcaac
ggtcagtgccactgcctacctgggtttggcggcctgacctgcagcgaatgtcaggagaat
cactggggagagcctcgcgtaaaatgcagtgcgtgcgactgcgagtcgagcggcgtgctc
acgcagcagtgccagcgcgccacagggcagtgcgcgtgccgccccggcgtggcggggcgg
cgctgcgaccgctgcgcccgtggcttctcgggcgccttcccggcgtgcgagccgtgccac
gagccctgcttccccgactgggaggcggccatctccgagctgggccggcgcgccggcggc
ctgagcgagcgggcgacgaggctgctgacgggcggcgccgacgcggggccatacgcacgg
aggatggccgaggtggaggagaacctcgcgggggcgcgcgagctgctggccgttcgcaac
gcgtcggccgcggccgtcgagaggctctcggggctcatcgacgatgttgggcggcaggtg
gaggccatgacgggccgcctggcgcagctcgaggccggcattggaggcgcggcgaagcag
aacggcgacgccaacgtgctgctgtcggagctcgatcgcgacgcgagggaggcgagcacg
cgcgccagcgagctcggataccagatcgacaccatcaagcactccaacttccgaggcgcc
tacggcagcgtcaaggactcgtaccagcagtcccgcgaggcggagcggaaggcgagcggc
gcggccaccaacccagcggggcccgtggctcgctccgaggccactcgccagcgcgccgag
aagttcatggccgccaagcgcgccgagctcgagcagcggctggacgccaacgccgacgcg
ctgcaggagctgggctgggaggcgcgccagctggagctcaacgagctaaacgagaaggtg
tgcggagtgacgagggacgtgccgtgtgcggagagcgcgtgcggcggcgtcggctgcagg
gacgaggacggccgcccgcactgcgggggcatgaactgcggcggcgtcgccaccgtggcc
tccaacgccctggagcggtccaccatcgccgaccgtgagatccagaaggccctgggggac
ctcgacaagctgcaccagcaggtcatggatgtgaagagcaaggcaggaaaggccaaggag
gaggctcagggcaccctgcagagagccaacggcacccgcgcgcaggtggagggcgcggtg
cagggcctgcgggagctcatcaagcagatcaaggagttcctcacggaggagggcgcgagc
cccgacagcatcgagctggtggcggagcgggtgctgcgcctcggcgtgccggcatcgccg
cagcagatcggccgcctcgccgacgagatcaaggagcgcgtgagcagcctggccaacgtc
gacgccatcctggcccgcacggccggcagcatcaatgaggccgagcgcctcctacaggac
gccaagagggccaaggcacgtgctgaaaacgccaagagcgccgcagagacggtgcgcaag
gcgctggcgggggccagggaggcgcaggccggggcggaggtcgccatccagcaggcccgg
tccgacctgcacgacacgcaggacacgctggcctcgaccgagtcggagacggcggccgcc
gggcagcgactccaggacgcgacggctcgcctgctgagcctcgagcgcgacgtcgatgcc
ctcaagatgaagacggcggccaacagcctcgcggctggcaaggccgacaaggcggccggc
atggccaagcagcgtgccgacgaggccaagcagatgcacgacggggagctgcgggaccgc
ttccgggcgctgcaggatctcttcgggaagaaggggcgcggggcggaggaggcgcggcgt
cgcgtcgagcagctccgggagcaggcgcgggccgtgctggccggagcgcaggcccgcttg
gcgcgcctcgccgagctggaagtggcctacgatgggaacgcggtggagctggagcgcaag
gcgcacaggctgcgcggtctcgaggacaagttgcgcgggatcgtctatgccatcaacaag
caaatcaacgtgtacaacacctgccagtag
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