Petromyzon marinus (sea lamprey): 116942493
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Entry
116942493 CDS
T09614
Name
(RefSeq) microphthalmia-associated transcription factor-like isoform X1
KO
K09105
transcription factor E3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116942493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116942493
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
116942493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
DUF3371
Motif
Other DBs
NCBI-GeneID:
116942493
NCBI-ProteinID:
XP_032810384
EnsemblRapid:
ENSPMAG00000017893
LinkDB
All DBs
Position
14:complement(15192638..15247935)
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AA seq
546 aa
AA seq
DB search
MSSRVQLRQELMREQLQEQERRELQQRRQQQHYQHQQHQQHQQQQLQHQYQQQQHYQQQQ
GTQCGSLTGQHRSDLVPLVTRPPPSPAISMSLPARPPLPPVPMEVLKVQTHLENPTRYHI
QQSQRQQLKQFLSTTLGYKVASQSLARSPQAQPGGGQATGGSLPLPQQQQHQQHHHQQQL
HTSVGSSAPNSPMAMLNIGSNSERELSGAQQQQQQPTSWSLPTCHADMMDDVIDDIISLE
SSYNDEPYTGIGARLEVTNTLPLSSSLYDGYGGQTLAVPAVALTSSSCPATLDNVKQEVT
EVEARAIVKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPVRDAAHCRDTRWNKG
TILKASVDYIRRMQKEQQRAKEMELRQRRLEHTNRSLLLRLQELEMQAQAHGVPIAYSVP
PDVPPIKQETPGGGGGGDNGAAARRDGDFFCSAPPSCGGAHGTPDLADGTPHFGPAVAAG
GGGGDARGASSGFAVDERLPGVYSPEPDPTSRLEDMLLEDNFSDSLLSPFSPRSLSRQGS
FSMDDG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccgtgtgcagctccgccaggagctcatgcgggagcagctgcaggagcaagag
agaagggagctgcaacagaggcggcagcagcagcactaccagcaccagcagcaccagcag
caccagcaacagcagctacagcaccagtaccagcagcagcagcactaccagcagcagcaa
ggcacgcagtgcggatcgctcacggggcagcaccggtcggacttggtgccgctggtgacc
agaccgccccccagcccggccatctccatgagcctgccggcacggccccccctgcccccc
gtccccatggaggtgctgaaggtccagactcacctggagaacccgacgcggtaccacatc
cagcagtcccagcggcagcagctcaagcagttcctgtcaacgacgctcgggtacaaagtg
gcgagccagtcgctggctcgctccccgcaggctcagccgggtggggggcaggccacgggg
ggctccctgcctttgccgcagcagcagcagcatcagcagcatcatcatcagcagcagctg
cacacgagcgtgggaagcagcgcccccaacagccccatggccatgttgaacatcggctcg
aattccgagcgcgagctcagcggggctcagcagcagcagcagcagccgacctcgtggagt
ctgccaacctgccatgccgatatgatggacgacgtgatcgatgacatcatcagcctggag
tcgagttacaacgacgagccctacacgggcataggcgcccgcctggaagtcaccaacacg
ctgccgctgtcgagcagcctctacgacggctatgggggccagacgctcgcagtgccggcc
gtggcgctcaccagctcctcgtgtccggccacgctggacaacgtcaagcaggaggtgacc
gaagttgaagcaagagccatcgtgaaggagcgccagaagaaggacaaccacaacctgatt
gagcgacgacggagattcaacatcaacgaccgcatcaaggagctggggacgctcatcccc
aagtccagcgaccccgtgcgcgatgcggcgcattgcagggacacgcgctggaacaagggt
accatcctcaaggcgtccgtcgactacatccgccgcatgcagaaggagcagcagagagcc
aaggagatggagctgaggcagcggcgcctggagcacaccaaccgcagcctgctgctccgc
ctgcaggagctggagatgcaggcccaggctcacggcgtgcccatcgcttactccgtgccg
cccgacgttccgcccatcaagcaggagacgccgggcggcggcggcggcggcgacaacggc
gccgccgctcgccgcgacggcgacttcttctgctcggctcctccgtcgtgcggtggcgcc
cacggcacgccggacctcgccgacggcacgccgcacttcggcccggcggtggcggccggc
ggaggcggcggagatgcgaggggagcgtcgagcggcttcgcggtggacgagcgcctgccg
ggcgtctactccccggagccggacccgacgtcgcgcctggaggacatgctcctggaggac
aacttctccgactcgctgctctcgccgttctcgccgcgctcgctcagccggcagggcagc
ttcagcatggacgacggctga
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integrated database retrieval system
