Petromyzon marinus (sea lamprey): 116944377
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Entry
116944377 CDS
T09614
Symbol
CHRND
Name
(RefSeq) acetylcholine receptor subunit delta isoform X1
KO
K04816
nicotinic acetylcholine receptor delta
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116944377 (CHRND)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116944377 (CHRND)
Ion channels [BR:
pmrn04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
116944377 (CHRND)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Cation_ATPase_C
Motif
Other DBs
NCBI-GeneID:
116944377
NCBI-ProteinID:
XP_032813844
EnsemblRapid:
ENSPMAG00000005080
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All DBs
Position
21:complement(2937438..2963731)
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AA seq
529 aa
AA seq
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MNRNRYSCDGGESNIESATQRAGESLVQNEEQRLYNDLFKNYNRDVRPTHDKDVPVDISL
GLSLSNLISLKEADETLLTNVWIDQTWTDYRLSWDPEEYGGIVELRVPSTKVWLPEIVLE
NNIDGQYTMALYCNVILDSSGLVYWLPPAIYRSYCSISVINYPFDWQNCTLVFRSLTYSA
REINMQLKLEQDQDPPNKFFTVEWIVTDKEAFTENGEWEIVHLPAKKHINTALSKDDTKY
QNITFYVIIQRKPLFYVINIIIPMVIISLIASLAYYLPCDCGEKMTVSISVLLAQTVFLF
LVAQKLPETSLEVPIIAKYLMFIMVLVTMVVLSSVVVLNLHHRSPSTHHLQPWMRKVFLE
RLPRILHMSQPEDSPDSGAPGLGPRRRSSLGLIATAEEYVHVKARSELMFERMSERHGLV
TRRTPAVRHAVADGVEQQQAELLLQLLRSAVQGALVIAQHTRDKNLHGEEKEAWNRVART
LDRLCLFVVGPVMVLGTITIFLSSILNRSPNVPFEGETFNYTPAQRRYI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggaatcgatattcgtgcgacggaggcgaatcgaatatcgaatccgcaacgcaa
cgagcgggcgagtccttggtgcaaaacgaggagcagcgactctacaacgacctcttcaaa
aactacaaccgtgacgtccgtcccacgcacgacaaggatgtccccgtggacatatccctg
gggctctcgctctccaacctcatctctctgaaagaggccgatgaaacgcttctcaccaac
gtgtggatcgatcaaacgtggaccgactaccggctcagttgggaccccgaggaatacggc
ggaatagtcgaactccgcgttccatcgactaaagtgtggctgcccgaaatcgtcctggag
aacaatatcgatgggcagtacacgatggcgctgtactgtaacgtgattctggatagcagc
gggcttgtgtattggctgccgcccgccatctaccgcagctattgctccataagcgtcatc
aactaccccttcgattggcagaactgcactctggtgttccgctcgcttacgtacagcgcc
cgtgagattaacatgcagctcaagttggagcaggatcaggatccccccaataagttcttc
accgtggaatggatcgtgaccgataaggaggccttcacggaaaacggcgaatgggagatt
gtgcacctgccagccaagaagcacattaacacagcgttgtccaaagacgacaccaagtac
cagaacatcaccttctacgtcatcatccaacgcaagccgctcttttacgtcattaacatc
atcatccccatggtcatcatcagcctcatcgccagcctggcctactacctcccctgtgac
tgcggggagaagatgactgtgtccatctcagtgctgctcgctcagaccgtgttcctcttc
ctcgtggcccagaagctccccgagacctccctcgaggtccccatcatcgccaagtacctg
atgttcataatggtgctcgtcactatggtggtgctgagctccgtcgtggtcctcaacctt
caccaccgctcgcccagcacacaccacctccagccctggatgcgcaaggttttcctggag
cgcctcccgcggatactgcacatgtcacagcccgaggactcgccggactccggcgcaccg
gggctggggccccgcaggcgcagctcgctgggcctcattgccacggcggaggagtacgtg
cacgtgaaggcgcgcagcgagctcatgttcgagcgcatgagcgagcggcacggcctcgtc
acgcgccgcacgcccgccgtgcggcacgcggtggcggacggcgtggagcagcagcaggct
gagttgctgctgcagctgctgaggtccgctgtgcagggggccctcgtcatcgcccagcac
acgcgcgacaagaacctgcacggggaggagaaggaggcgtggaaccgggtggcgcgcacg
ctggaccgcctgtgcctcttcgtggtggggcccgtcatggtgctgggcaccatcaccatc
ttcctgagcagcatcttgaaccgctcgccgaacgtacccttcgagggcgagacgttcaac
tacacgcccgcgcagcgccgctacatctag
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