Petromyzon marinus (sea lamprey): 116946071
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Entry
116946071 CDS
T09614
Name
(RefSeq) tropomyosin alpha-4 chain-like
KO
K09290
tropomyosin 3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04260
Cardiac muscle contraction
pmrn04261
Adrenergic signaling in cardiomyocytes
pmrn04814
Motor proteins
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116946071
04820 Cytoskeleton in muscle cells
116946071
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116946071
04261 Adrenergic signaling in cardiomyocytes
116946071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116946071
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
116946071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Crescentin
Laminin_II
V-SNARE_C
DivIC
Motif
Other DBs
NCBI-GeneID:
116946071
NCBI-ProteinID:
XP_032816797
EnsemblRapid:
ENSPMAG00000033588
LinkDB
All DBs
Position
26:4565402..4571936
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AA seq
280 aa
AA seq
DB search
MDDIHSLECVRSKIKTLQCQAKSAEERAACLNSDLYSEKQAREELKFSTQMCPLHAFLLH
ARVRDALRLRVSVTQAESRVACMGKQVHVTRAELSRAEQDLHLVLDQLNDAEHVACEYKK
AMCDLEDRVLCGEQTIEEQCMQLKRAREMLTETECQFKEANRVLRILEGDLIKSEERACC
SEQGVVQLEKKLKKLKEELLLMFRNEEMLLHSEKMYEKEMASQMERLHDMEVRAECAEKH
TRKLEKVVHQLEDKLSQAECVNVDLESEMTHIFCELKRCL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggacgacattcactccctcgagtgcgtccgctcgaagattaagacgttgcaatgccag
gcgaagagtgccgaggagcgggcagcctgcctcaatagcgacctctactcggagaagcag
gcccgcgaggagttgaagttcagcacacagatgtgtcctttgcatgcattcttgttgcac
gcgcgtgtccgcgacgcactccgtttgcgcgtgtccgtgacgcaggcggagagccgcgtg
gcgtgcatgggcaagcaggtgcacgtgacacgggcagagctgagccgtgccgagcaggac
ctgcatctggtgctggatcagctaaacgacgccgagcacgtggcctgcgagtacaagaag
gcaatgtgtgacctggaagaccgcgtgctctgcggggagcagaccatcgaggagcagtgc
atgcagctgaagcgcgctcgggagatgctcacggagaccgagtgccaattcaaggaggcc
aacagagtgctgcggattctggaaggcgacctcatcaagtcggaggagcgcgcatgctgc
tctgagcagggcgtggtgcagctggagaagaagctgaagaagttgaaggaggagctgctg
ctcatgttccgcaacgaggagatgctgctgcactcggagaagatgtacgagaaggagatg
gcgagccagatggagaggctgcacgacatggaggtgcgtgcggagtgcgcggagaagcac
acgcgcaagctggagaaggtggtgcaccagctggaggacaaactctcccaggctgagtgc
gtgaacgtcgacctggagagtgagatgacgcacatcttctgcgagctcaagcgatgcctc
tga
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