Petromyzon marinus (sea lamprey): 116950991
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Entry
116950991 CDS
T09614
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04210
Apoptosis
pmrn04218
Cellular senescence
pmrn04620
Toll-like receptor signaling pathway
pmrn04621
NOD-like receptor signaling pathway
pmrn04622
RIG-I-like receptor signaling pathway
pmrn04623
Cytosolic DNA-sensing pathway
pmrn04625
C-type lectin receptor signaling pathway
pmrn04920
Adipocytokine signaling pathway
pmrn05132
Salmonella infection
pmrn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116950991
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116950991
04218 Cellular senescence
116950991
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116950991
04621 NOD-like receptor signaling pathway
116950991
04622 RIG-I-like receptor signaling pathway
116950991
04623 Cytosolic DNA-sensing pathway
116950991
04625 C-type lectin receptor signaling pathway
116950991
09152 Endocrine system
04920 Adipocytokine signaling pathway
116950991
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116950991
09171 Infectious disease: bacterial
05132 Salmonella infection
116950991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116950991
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116950991
BRITE hierarchy
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
116950991
NCBI-ProteinID:
XP_032825135
EnsemblRapid:
ENSPMAG00000006461
LinkDB
All DBs
Position
41:complement(7483202..7539317)
Genome browser
AA seq
990 aa
AA seq
DB search
MGDDLYHLDTNLEMLEQYNTVDIHAFQNEFEVPQPVVTGPYLQITEEPKQRGFRFRYPCE
GPSHGGLPGCSSERNKKTFPTVRICKYFGLAKVVVQLVTENAPYRLHPHSLVGKNAENGA
VSCTVGPHDMTAMFPSLGVLHVTKKSVASVLEKLWSDAQVSGLASIGNIVLENSFNNVNA
RALTDAEARQIKNDAQQGAKTIDLSVVRLMFTAYLPDSNGIFTHRLPPVFSNPIYDSKAP
NANNLKIVRMDKTSGCVTGGDEVYLLCDKVQKEDIQVRFFHDDWEAWGNFGPTDVHKQYA
IVFKTPRYCNVDISKSVTVFVQLRRKSDSETSEAKPFIYYPQKQDKEEVARKRQKTLPHF
SDHLGGGGMGGGMGGGGMGGGMGGGMGGGMGGGMGGGMGGGMSGGMSSTSMAPGAGGGAT
EFFGGPSTESPTGGSFSALGGGGGSMWSHGSHSDFSGGFNFQTNAMNMNFSELTLPVLAP
SHQQDIAGINYAYQGLEFDGSGGVQGSDGMEAFEIIKRPDEEDSDSDDDHLETDAAMEEM
RPTVHAFPVASPLLKGRERPGFVPLKPAHVIGQSPKKVPFVRESPQPTRKPAEARTPKVT
VGQLVKDSAVQTTGRNLEATLLLLAERTAKAQKDYAITADVRMLLAPQRHLTGVQDDNGD
APLHLAVIHQRQLVVQQLLQVIVTIPHQNIVNLPNDLKQTPLHLSVITRQSEVTQILLRS
GADPMVPDRHGNLVVHTAVANNDENTLRILIEWSGEAADRLVDSVNYEGYYPVHVAVMAN
SLACLKMLVNAGADVNRPELTYGRTALHCAVEAENLSLAAYLADQHQTEVDMVTYDGNTP
LHVATGRRLLPMVALLVQAGADVHAENFEAPTYADGFDYVSDDEEEDDSECAESDSGIAR
GTTPLHLAAGNKEVYDILCGKQYESRKPPAVPAADLRAVQSIDSVCDSGLTASIMHLSLE
GSELDSASRRSAASNLIATPVRPADTKSLQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgatctgtatcatttagacacaaacttggaaatgctggagcagtataacacc
gtggacattcatgcgttccaaaacgaattcgaggttccgcagcccgtcgtgactggacct
tacctgcaaataacagaggagcctaaacagagaggtttccgctttcgctacccctgtgaa
ggcccgtcgcacggagggctgcccggttgctcgagcgagcgcaacaagaagaccttcccc
accgtcaggatctgcaaatactttggcctagcgaaggtggtggtgcagctggtcaccgag
aatgcgccataccgcctgcacccccacagcctggtgggcaagaatgctgagaacggtgcc
gtcagctgcactgtgggcccacacgacatgacggcgatgttccccagcctcggtgtgctg
cacgtcaccaagaagagcgtggcatctgtactggagaagttgtggtcggatgcacaggtc
tccgggctggccagcattggcaacatcgttctcgagaacagcttcaacaacgtcaacgcg
cgggccctgacagacgcggaggcgaggcagatcaagaacgacgcgcagcagggtgccaag
accatcgacttgagcgtggtgcgcctcatgttcaccgcctacctgcccgacagcaacggc
atcttcacccaccgccttccccccgtcttctccaaccccatctacgacagcaaggccccc
aatgccaacaacctgaagatcgtgcgcatggacaaaacgtcgggctgcgtgacgggaggc
gacgaggtgtacctgctctgtgacaaggtgcaaaaagaggacatccaggtgcgatttttt
cacgacgattgggaagcttggggaaatttcggaccgacggatgttcacaaacagtacgcc
atcgtgttcaagacgccgcgttactgcaacgtggacattagcaagtcggtcaccgtgttc
gtgcagctgaggaggaagtcggacagtgagacgagcgaggcgaagccgttcatctactac
ccgcagaaacaagacaaggaggaggtggcccgcaagcggcagaagacgttgccgcacttc
tcggaccacttgggcggcggcggcatgggcggcggcatgggcggcggtggcatgggcggc
ggcatgggtggtggcatgggcggcggcatgggcggcggcatgggtggtggcatgggcggt
ggcatgagcggtggcatgagctccacctccatggctcctggcgctggcgggggcgccacc
gagtttttcggtggcccgagcacggagagcccgacgggaggctccttcagcgcgttgggc
ggcggtggcggcagtatgtggagccacggcagccactccgattttagcggtggattcaac
tttcaaacaaacgccatgaacatgaacttctctgagctcactctgccagttctggcacca
tctcatcagcaagatattgctggtatcaactacgcttaccagggtcttgaatttgacggc
tccggtggcgttcaaggttcagacgggatggaagcgttcgagattatcaagcgcccggat
gaggaggacagcgacagcgacgacgaccacctggagaccgacgcggcgatggaggagatg
cggccaaccgtgcacgccttcccggtggcgtcgccgttgctcaagggacgcgagcggccc
gggttcgttccgctcaagccggcccacgtgatcggccagagtcccaagaaggtccccttc
gtccgcgagtccccgcagcccacgaggaagcctgcggaagctcggacaccaaaggtcacc
gtggggcagctggtcaaggactcggccgtgcagaccaccggcaggaatctcgaagcgacc
ctgctgcttctagccgagcgcacggcgaaggcgcagaaggactacgcgataacggccgat
gtgcgcatgctgctcgccccgcagcgccacctcacgggtgtgcaggatgacaacggggat
gcacctctacacctggccgtgatccaccagagacaactcgtggtgcaacagctcctgcag
gtcattgtgaccatccctcaccagaatatcgtcaacctgcccaatgacctcaagcagact
ccactgcacctctcggtgatcacgcggcagtccgaggtgacccagattctgctgcgctcg
ggcgccgaccccatggtgcccgaccgccacgggaatcttgtggtgcacacggccgtggcc
aataacgacgagaacacgctccgcatcctcatcgagtggagtggcgaagcggccgacagg
ctggtggacagcgtcaactacgaaggctactaccccgtgcacgtggctgtgatggccaac
agtttggcgtgcctcaagatgctggtgaacgctggagcggatgtcaaccggccggagctg
acgtatggacgcacggcgcttcactgcgccgtggaggcagagaacctgagtcttgctgct
tacctcgccgaccagcaccagacggaggtggacatggtgacgtacgacggcaacacgccg
ctgcacgtggcgacggggcgcagattgttgcccatggtggcgctgctggtgcaagcgggt
gccgacgtgcacgccgagaacttcgaggcgcccacgtacgccgacggcttcgactacgtc
tccgatgacgaggaggaggacgacagcgagtgcgcggagagcgactcgggcatcgcgcgc
ggcaccaccccgctccatcttgccgccggcaacaaggaggtgtacgatatcttgtgtgga
aaacagtacgagtcgagaaaaccgcccgccgtcccggctgcagacctgcgggcagtgcag
agcatcgacagcgtatgtgacagtggattgacggcctccatcatgcacctcagcctagaa
ggctccgagctggactctgcgtctcggcgctccgctgccagcaatctcatcgccaccccg
gtccgccccgctgacacgaaaagcctgcagtga
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